RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
LMBR1-201ENST00000353442 SDIM1Q6ZPB5 146 aa10.16□□□□□ -0.78
LMBR1-201ENST00000353442 WISP2O76076 250 aa10.15□□□□□ -0.78
LMBR1-201ENST00000353442 Q8N976 141 aa10.15□□□□□ -0.78
LMBR1-201ENST00000353442 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
LMBR1-201ENST00000353442 SERP2Q8N6R1 65 aa10.15□□□□□ -0.79
LMBR1-201ENST00000353442 HELZP42694 1942 aaKnown RBP10.14□□□□□ -0.79
LMBR1-201ENST00000353442 PATE2Q6UY27 113 aa10.14□□□□□ -0.79
LMBR1-201ENST00000353442 ENHOQ6UWT2 76 aa10.14□□□□□ -0.79
LMBR1-201ENST00000353442 PROK1P58294 105 aa10.14□□□□□ -0.79
LMBR1-201ENST00000353442 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
LMBR1-201ENST00000353442 Q6ZSV7 163 aa10.14□□□□□ -0.79
LMBR1-201ENST00000353442 ZFAND3Q9H8U3 227 aa10.14□□□□□ -0.79
LMBR1-201ENST00000353442 PIK3CD-AS1Q5SR53 167 aa10.13□□□□□ -0.79
LMBR1-201ENST00000353442 SPATA12Q7Z6I5 190 aa10.13□□□□□ -0.79
LMBR1-201ENST00000353442 E7EUB6 86 aa10.13□□□□□ -0.79
LMBR1-201ENST00000353442 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
LMBR1-201ENST00000353442 C22orf34Q6ZV56 151 aa10.13□□□□□ -0.79
LMBR1-201ENST00000353442 MIFP14174 115 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 POM121L12Q8N7R1 296 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
LMBR1-201ENST00000353442 FXYD2P54710 66 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 CCKP06307 115 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 FAM30AQ9NZY2 134 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 WFDC2Q14508 124 aa10.12□□□□□ -0.79
LMBR1-201ENST00000353442 CDPF1Q6NVV7 123 aa10.11□□□□□ -0.79
LMBR1-201ENST00000353442 LRRC75A-AS1Q8N1F1 130 aa10.11□□□□□ -0.79
LMBR1-201ENST00000353442 PTH2Q96A98 100 aa10.11□□□□□ -0.79
LMBR1-201ENST00000353442 POU2AF1Q16633 256 aa10.11□□□□□ -0.79
LMBR1-201ENST00000353442 LTBP1Q14766 1721 aa10.1□□□□□ -0.79
LMBR1-201ENST00000353442 C20orf197Q8N268 126 aa10.1□□□□□ -0.79
LMBR1-201ENST00000353442 SMIM9A6NGZ8 99 aa10.1□□□□□ -0.79
LMBR1-201ENST00000353442 Q8N9L7 120 aa10.1□□□□□ -0.79
LMBR1-201ENST00000353442 TNFRSF13BO14836 293 aaPredicted RBP10.1□□□□□ -0.79
LMBR1-201ENST00000353442 PRM2P04554 102 aa10.1□□□□□ -0.79
LMBR1-201ENST00000353442 IGFL2Q6UWQ7 119 aa10.1□□□□□ -0.79
LMBR1-201ENST00000353442 BRI3O95415 125 aa10.09□□□□□ -0.79
LMBR1-201ENST00000353442 Q8NA96 180 aa10.09□□□□□ -0.79
LMBR1-201ENST00000353442 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
LMBR1-201ENST00000353442 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
LMBR1-201ENST00000353442 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
LMBR1-201ENST00000353442 DSCAML1Q8TD84 2053 aa10.09□□□□□ -0.79
LMBR1-201ENST00000353442 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
LMBR1-201ENST00000353442 SPTAN1Q13813 2472 aaKnown RBP10.08□□□□□ -0.8
LMBR1-201ENST00000353442 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
LMBR1-201ENST00000353442 TCL1BO95988 128 aa10.08□□□□□ -0.8
LMBR1-201ENST00000353442 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
LMBR1-201ENST00000353442 C20orf203Q8NBC4 194 aa10.08□□□□□ -0.8
LMBR1-201ENST00000353442 A6NED7 52 aa10.08□□□□□ -0.8
LMBR1-201ENST00000353442 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
LMBR1-201ENST00000353442 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 ZSWIM8A7E2V4 1837 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 RLFQ13129 1914 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 GDF5OSQ5U4N7 250 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 MIAQ16674 131 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 C20orf173Q96LM9 149 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 PLA2G2AP14555 144 aa10.07□□□□□ -0.8
LMBR1-201ENST00000353442 ADAMTS9Q9P2N4 1935 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 J3KT08 172 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 C6orf99Q4VX62 202 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 PCNX1Q96RV3 2341 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 E9PLD3 99 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 ESRGQ1W209 222 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 LINC01556Q5JQF7 62 aa10.06□□□□□ -0.8
LMBR1-201ENST00000353442 LINC00337Q8N6G1 96 aa10.05□□□□□ -0.8
LMBR1-201ENST00000353442 NUPR1O60356 82 aa10.05□□□□□ -0.8
LMBR1-201ENST00000353442 MRPL55Q7Z7F7 128 aaKnown RBP10.05□□□□□ -0.8
LMBR1-201ENST00000353442 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
LMBR1-201ENST00000353442 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
LMBR1-201ENST00000353442 A0A1W2PNU3 283 aaPredicted RBP10.04□□□□□ -0.8
LMBR1-201ENST00000353442 PDE6GP18545 87 aa10.04□□□□□ -0.8
LMBR1-201ENST00000353442 IGHV6-1A0A0B4J1U7 121 aa10.04□□□□□ -0.8
LMBR1-201ENST00000353442 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
LMBR1-201ENST00000353442 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
LMBR1-201ENST00000353442 LMO4P61968 165 aa10.04□□□□□ -0.8
LMBR1-201ENST00000353442 SPANXCQ9NY87 97 aa10.04□□□□□ -0.8
LMBR1-201ENST00000353442 MED13Q9UHV7 2174 aa10.04□□□□□ -0.8
LMBR1-201ENST00000353442 C10orf25Q5T742 122 aa10.03□□□□□ -0.8
LMBR1-201ENST00000353442 THSD7BQ9C0I4 1608 aa10.03□□□□□ -0.8
LMBR1-201ENST00000353442 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
LMBR1-201ENST00000353442 CREBBPQ92793 2442 aa10.03□□□□□ -0.8
LMBR1-201ENST00000353442 A8MZ25 164 aa10.03□□□□□ -0.8
LMBR1-201ENST00000353442 M0QXV9 152 aa10.03□□□□□ -0.8
LMBR1-201ENST00000353442 CFAP126Q5VTH2 177 aa10.02□□□□□ -0.8
LMBR1-201ENST00000353442 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
LMBR1-201ENST00000353442 ZNF80P51504 273 aaPredicted RBP10.02□□□□□ -0.81
LMBR1-201ENST00000353442 VWA8A3KMH1 1905 aa10.02□□□□□ -0.81
LMBR1-201ENST00000353442 XGP55808 180 aa10.01□□□□□ -0.81
LMBR1-201ENST00000353442 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
LMBR1-201ENST00000353442 TDRG1Q3Y452 100 aa10.01□□□□□ -0.81
LMBR1-201ENST00000353442 IGLV1-47P01700 117 aa10□□□□□ -0.81
LMBR1-201ENST00000353442 NBASA2RRP1 2371 aa10□□□□□ -0.81
LMBR1-201ENST00000353442 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
LMBR1-201ENST00000353442 MALRD1Q5VYJ5 2156 aa10□□□□□ -0.81
LMBR1-201ENST00000353442 C1orf134Q5TEV5 83 aa10□□□□□ -0.81
LMBR1-201ENST00000353442 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
LMBR1-201ENST00000353442 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
LMBR1-201ENST00000353442 U3KQK5 164 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms