RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 NDUFA12Q9UI09 145 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 C9orf129Q5T035 196 aaKnown RBP7.88□□□□□ -1.15
CAPN3-203ENST00000349748 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 LINC00846Q9NV44 126 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 COL12A1Q99715 3063 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 CHD6Q8TD26 2715 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 POLEQ07864 2286 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 TRAV12-2A0A075B6T6 113 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 IGHV1-46P01743 117 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 POLR2KP53803 58 aaKnown RBP7.88□□□□□ -1.15
CAPN3-203ENST00000349748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 IL17DQ8TAD2 202 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 FAM218AQ96MZ4 157 aa7.88□□□□□ -1.15
CAPN3-203ENST00000349748 SPTAN1Q13813 2472 aaKnown RBP7.88□□□□□ -1.15
CAPN3-203ENST00000349748 COX7A2LO14548 114 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 BEAN1Q3B7T3 259 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 A0A087WWL8 130 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 CLPSL1A2RUU4 121 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 GNRH2O43555 120 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 LYPD2Q6UXB3 125 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 PRIMA1Q86XR5 153 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 FAM215AQ9Y5M1 114 aa7.87□□□□□ -1.15
CAPN3-203ENST00000349748 IGHV1-3A0A0C4DH29 117 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 F5H697 171 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 TMEM178BH3BS89 294 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 BUB3O43684 328 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 DNAL4O96015 105 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 HOXD3P31249 432 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-203ENST00000349748 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 A0A0U1RRA0 63 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 VCYO14598 125 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 INAFM2P0DMQ5 153 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 DEFB1P60022 68 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 SUMO4Q6EEV6 95 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 LINC00482Q8N8I6 264 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 NDUFC2O95298 119 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 GHRHP01286 108 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 NUP37Q8NFH4 326 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
CAPN3-203ENST00000349748 FAM208BQ5VWN6 2430 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 TRAV23DV6A0A075B6W5 121 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 EPM2AB3EWF7 344 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 LINC00315P59091 139 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
CAPN3-203ENST00000349748 RNASE6Q93091 150 aaKnown RBP7.85□□□□□ -1.15
CAPN3-203ENST00000349748 CFAP46Q8IYW2 2715 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 IGLV3-9A0A075B6K5 115 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 PPP1R17O96001 155 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 CTSGP08311 255 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 IGHV1-8P0DP01 117 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 PSMB8P28062 276 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 Q6JHZ5 121 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 VMO1Q7Z5L0 202 aa7.85□□□□□ -1.15
CAPN3-203ENST00000349748 SPTBN1Q01082 2364 aaKnown RBP7.84□□□□□ -1.15
CAPN3-203ENST00000349748 UBE2D4Q9Y2X8 147 aa7.84□□□□□ -1.15
CAPN3-203ENST00000349748 PRB1P04280 392 aa7.84□□□□□ -1.15
CAPN3-203ENST00000349748 ABCA4P78363 2273 aa7.84□□□□□ -1.15
CAPN3-203ENST00000349748 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 COX7A1P24310 79 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RPL28P46779 137 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 NDUFC2-KCTD14E9PQ53 114 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 XCL1P47992 114 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 XCL2Q9UBD3 114 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 IGLV11-55A0A075B6I3 123 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 TRBV12-3P01733 135 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 IGHV1-69P01742 117 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RBMY1A1P0DJD3 496 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RBMY1CP0DJD4 496 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RNASE3P12724 160 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RPL11P62913 178 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 RBMY1FQ15415 496 aaKnown RBP7.83□□□□□ -1.16
CAPN3-203ENST00000349748 FAM74A4Q5TZK3 123 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 LYPD5Q6UWN5 251 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 KIF25-AS1Q9Y6Z4 181 aa7.83□□□□□ -1.16
CAPN3-203ENST00000349748 IGLV4-3A0A075B6K6 122 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 SS18Q15532 418 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 LRBAP50851 2863 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 MUC4Q99102 2169 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 IGHV4OR15-8A0A075B7B6 117 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 A0A087WW49 117 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 CCL21O00585 134 aa7.82□□□□□ -1.16
CAPN3-203ENST00000349748 BBC3Q96PG8 261 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-203ENST00000349748 IGHV1-58A0A0C4DH39 117 aa7.81□□□□□ -1.16
CAPN3-203ENST00000349748 H7BZZ5 65 aa7.81□□□□□ -1.16
CAPN3-203ENST00000349748 NDUFB3O43676 98 aa7.81□□□□□ -1.16
CAPN3-203ENST00000349748 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-203ENST00000349748 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
CAPN3-203ENST00000349748 IGHG2P01859 326 aa7.81□□□□□ -1.16
CAPN3-203ENST00000349748 RNASE4P34096 147 aaKnown RBP7.81□□□□□ -1.16
CAPN3-203ENST00000349748 ZFAND2AQ8N6M9 145 aa7.8□□□□□ -1.16
CAPN3-203ENST00000349748 CCL17Q92583 94 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms