RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 A0A0J9YX75 114 aa13.8□□□□□ -0.2
SCARF1-202ENST00000348987 COX6CP09669 75 aa13.8□□□□□ -0.2
SCARF1-202ENST00000348987 BLCAPP62952 87 aa13.8□□□□□ -0.2
SCARF1-202ENST00000348987 TRGV11A0A075B6L2 103 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 APRG1Q8IVJ8 170 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 TMEM126AQ9H061 195 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 CREBBPQ92793 2442 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 TRAV8-3A0A0A6YYJ7 113 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 TRBV7-7A0A0K0K1E9 115 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 FAM240AA0A1B0GVK7 77 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 FBN2P35556 2912 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
SCARF1-202ENST00000348987 FAM236AA0A1B0GUQ0 79 aa13.78□□□□□ -0.2
SCARF1-202ENST00000348987 FAM236BA0A1B0GV22 79 aa13.78□□□□□ -0.2
SCARF1-202ENST00000348987 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
SCARF1-202ENST00000348987 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
SCARF1-202ENST00000348987 TRBV6-5A0A0K0K1A5 114 aa13.78□□□□□ -0.2
SCARF1-202ENST00000348987 EDN2P20800 178 aa13.78□□□□□ -0.2
SCARF1-202ENST00000348987 DOPEY2Q9Y3R5 2298 aa13.77□□□□□ -0.2
SCARF1-202ENST00000348987 LST1O00453 97 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 NSUN5P1Q3KNT7 163 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 TIMM21Q9BVV7 248 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 ABCA12Q86UK0 2595 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 IGLV4-3A0A075B6K6 122 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 H3BUX3 64 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 I3L3M4 83 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 DEFB121Q5J5C9 76 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 CEMP1Q6PRD7 247 aaPredicted RBP13.77□□□□□ -0.21
SCARF1-202ENST00000348987 C20orf203Q8NBC4 194 aa13.77□□□□□ -0.21
SCARF1-202ENST00000348987 M0QY20 66 aa13.76□□□□□ -0.21
SCARF1-202ENST00000348987 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
SCARF1-202ENST00000348987 CUBNO60494 3623 aa13.76□□□□□ -0.21
SCARF1-202ENST00000348987 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
SCARF1-202ENST00000348987 TRAV12-3A0A0B4J271 114 aa13.76□□□□□ -0.21
SCARF1-202ENST00000348987 PRB1P04280 392 aa13.76□□□□□ -0.21
SCARF1-202ENST00000348987 A8MZ25 164 aa13.75□□□□□ -0.21
SCARF1-202ENST00000348987 PTPN13Q12923 2485 aa13.75□□□□□ -0.21
SCARF1-202ENST00000348987 PF4V1P10720 104 aa13.75□□□□□ -0.21
SCARF1-202ENST00000348987 RHOHQ15669 191 aa13.75□□□□□ -0.21
SCARF1-202ENST00000348987 YAE1D1Q9NRH1 226 aa13.75□□□□□ -0.21
SCARF1-202ENST00000348987 SORL1Q92673 2214 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 ID1P41134 155 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 EPG5Q9HCE0 2579 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 MXRA5Q9NR99 2828 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 IGHV4-30-2A0A087WSY4 118 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 NDUFA4O00483 81 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 LINC00694P0DN24 101 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 CCL19Q99731 98 aa13.74□□□□□ -0.21
SCARF1-202ENST00000348987 NDUFA12Q9UI09 145 aa13.73□□□□□ -0.21
SCARF1-202ENST00000348987 KLLNB2CW77 178 aa13.73□□□□□ -0.21
SCARF1-202ENST00000348987 RNASE13Q5GAN3 156 aaKnown RBP13.72□□□□□ -0.21
SCARF1-202ENST00000348987 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
SCARF1-202ENST00000348987 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
SCARF1-202ENST00000348987 IGHG2P01859 326 aa13.72□□□□□ -0.21
SCARF1-202ENST00000348987 ATP5J2P56134 94 aa13.72□□□□□ -0.21
SCARF1-202ENST00000348987 MIAQ16674 131 aa13.72□□□□□ -0.21
SCARF1-202ENST00000348987 RHPN1-AS1Q9BWJ2 59 aa13.72□□□□□ -0.21
SCARF1-202ENST00000348987 TMEM61Q8N0U2 210 aa13.71□□□□□ -0.21
SCARF1-202ENST00000348987 ANKRD17O75179 2603 aaKnown RBP13.71□□□□□ -0.21
SCARF1-202ENST00000348987 DAND5Q8N907 189 aa13.71□□□□□ -0.22
SCARF1-202ENST00000348987 DUX5Q96PT3 197 aa13.71□□□□□ -0.22
SCARF1-202ENST00000348987 AVPP01185 164 aa13.7□□□□□ -0.22
SCARF1-202ENST00000348987 C9orf153Q5TBE3 101 aa13.7□□□□□ -0.22
SCARF1-202ENST00000348987 MAPK1IP1LQ8NDC0 245 aa13.7□□□□□ -0.22
SCARF1-202ENST00000348987 C10orf105Q8TEF2 133 aa13.7□□□□□ -0.22
SCARF1-202ENST00000348987 SMCR5Q8TEV8 140 aa13.7□□□□□ -0.22
SCARF1-202ENST00000348987 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
SCARF1-202ENST00000348987 CD28P10747 220 aa13.69□□□□□ -0.22
SCARF1-202ENST00000348987 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
SCARF1-202ENST00000348987 A6NDX4 124 aa13.69□□□□□ -0.22
SCARF1-202ENST00000348987 FAM104AQ969W3 186 aa13.69□□□□□ -0.22
SCARF1-202ENST00000348987 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
SCARF1-202ENST00000348987 MRPS36P82909 103 aaKnown RBP13.68□□□□□ -0.22
SCARF1-202ENST00000348987 TRAV12-2A0A075B6T6 113 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 IGHV3-16A0A0C4DH30 117 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 C3orf22Q8N5N4 141 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 IMUPQ9GZP8 106 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 NDUFA7O95182 113 aa13.67□□□□□ -0.22
SCARF1-202ENST00000348987 C9orf85Q96MD7 179 aa13.66□□□□□ -0.22
SCARF1-202ENST00000348987 IGKV3-20P01619 116 aa13.66□□□□□ -0.22
SCARF1-202ENST00000348987 KLK5Q9Y337 293 aaPredicted RBP13.66□□□□□ -0.22
SCARF1-202ENST00000348987 VSIG2Q96IQ7 327 aa13.65□□□□□ -0.22
SCARF1-202ENST00000348987 DAZ1Q9NQZ3 744 aaKnown RBP13.65□□□□□ -0.22
SCARF1-202ENST00000348987 IGLV1-40P01703 118 aa13.65□□□□□ -0.22
SCARF1-202ENST00000348987 ACYP1P07311 99 aa13.65□□□□□ -0.22
SCARF1-202ENST00000348987 DNAJC30Q96LL9 226 aa13.65□□□□□ -0.22
SCARF1-202ENST00000348987 DCANP1Q8TF63 244 aa13.64□□□□□ -0.23
SCARF1-202ENST00000348987 HERVK_113P63121 156 aa13.64□□□□□ -0.23
SCARF1-202ENST00000348987 CITED2Q99967 270 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-202ENST00000348987 MSMBP08118 114 aa13.63□□□□□ -0.23
SCARF1-202ENST00000348987 CSDC2Q9Y534 153 aaKnown RBP13.63□□□□□ -0.23
SCARF1-202ENST00000348987 IGHV3-73A0A0B4J1V6 119 aa13.62□□□□□ -0.23
SCARF1-202ENST00000348987 UQCRQO14949 82 aa13.62□□□□□ -0.23
SCARF1-202ENST00000348987 NAV2Q8IVL1 2488 aa13.62□□□□□ -0.23
SCARF1-202ENST00000348987 MYO9AB2RTY4 2548 aa13.62□□□□□ -0.23
SCARF1-202ENST00000348987 H3BUA1 57 aa13.61□□□□□ -0.23
SCARF1-202ENST00000348987 LINC00643Q86TS7 51 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms