RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 FBXL19-AS1Q494R0 122 aa11.52□□□□□ -0.57
LRP8-202ENST00000347547 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.57
LRP8-202ENST00000347547 C5orf38Q86SI9 138 aa11.52□□□□□ -0.57
LRP8-202ENST00000347547 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
LRP8-202ENST00000347547 COX7A2LO14548 114 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 NPFFO15130 113 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 ID1P41134 155 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 ADORA2A-AS1P86434 159 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
LRP8-202ENST00000347547 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 NBASA2RRP1 2371 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 HERVK_113P63121 156 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 CDSNQ15517 529 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 USMG5Q96IX5 58 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 PEMTQ9UBM1 199 aa11.5□□□□□ -0.57
LRP8-202ENST00000347547 HRNRQ86YZ3 2850 aaPredicted RBP11.49□□□□□ -0.57
LRP8-202ENST00000347547 H3BUA1 57 aa11.49□□□□□ -0.57
LRP8-202ENST00000347547 COL6A6A6NMZ7 2263 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 J3KT08 172 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 C5orf47Q569G3 176 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 DAND5Q8N907 189 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 LINC00527Q9UJ94 153 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 HIVEP3Q5T1R4 2406 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 SVEP1Q4LDE5 3571 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 CCL21O00585 134 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 NDUFA1O15239 70 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 COX7CP15954 63 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 NPC2P61916 151 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 MED13LQ71F56 2210 aa11.48□□□□□ -0.57
LRP8-202ENST00000347547 TRACP01848 142 aa11.47□□□□□ -0.57
LRP8-202ENST00000347547 RPS28P62857 69 aaKnown RBP11.47□□□□□ -0.57
LRP8-202ENST00000347547 IGKV3-7A0A075B6H7 116 aa11.47□□□□□ -0.57
LRP8-202ENST00000347547 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
LRP8-202ENST00000347547 CRYGAP11844 174 aa11.47□□□□□ -0.57
LRP8-202ENST00000347547 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
LRP8-202ENST00000347547 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
LRP8-202ENST00000347547 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
LRP8-202ENST00000347547 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
LRP8-202ENST00000347547 ASH1LQ9NR48 2969 aaKnown RBP11.46□□□□□ -0.57
LRP8-202ENST00000347547 BEAN1Q3B7T3 259 aa11.46□□□□□ -0.57
LRP8-202ENST00000347547 C2orf48Q96LS8 159 aa11.46□□□□□ -0.58
LRP8-202ENST00000347547 A8MZ25 164 aa11.45□□□□□ -0.58
LRP8-202ENST00000347547 PRRC2AP48634 2157 aaKnown RBP11.45□□□□□ -0.58
LRP8-202ENST00000347547 CFAP46Q8IYW2 2715 aa11.45□□□□□ -0.58
LRP8-202ENST00000347547 K7EMT4 169 aa11.45□□□□□ -0.58
LRP8-202ENST00000347547 DAZ2Q13117 558 aaKnown RBP11.45□□□□□ -0.58
LRP8-202ENST00000347547 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
LRP8-202ENST00000347547 DAZ4Q86SG3 579 aaKnown RBP11.45□□□□□ -0.58
LRP8-202ENST00000347547 DAZ3Q9NR90 486 aaKnown RBP11.45□□□□□ -0.58
LRP8-202ENST00000347547 CACNA1BQ00975 2339 aa11.44□□□□□ -0.58
LRP8-202ENST00000347547 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
LRP8-202ENST00000347547 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
LRP8-202ENST00000347547 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
LRP8-202ENST00000347547 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
LRP8-202ENST00000347547 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
LRP8-202ENST00000347547 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 INAFM2P0DMQ5 153 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 TIRAPP58753 221 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 C22orf24Q9Y442 160 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 IGSF10Q6WRI0 2623 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 ATOX1O00244 68 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 CHCHD7Q9BUK0 85 aa11.42□□□□□ -0.58
LRP8-202ENST00000347547 SMIM9A6NGZ8 99 aa11.41□□□□□ -0.58
LRP8-202ENST00000347547 IGHG2P01859 326 aa11.41□□□□□ -0.58
LRP8-202ENST00000347547 BAALC-AS2P0C853 105 aa11.41□□□□□ -0.58
LRP8-202ENST00000347547 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
LRP8-202ENST00000347547 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
LRP8-202ENST00000347547 GAGE2AQ6NT46 116 aa11.41□□□□□ -0.58
LRP8-202ENST00000347547 FAM19A5Q7Z5A7 132 aaPredicted RBP11.41□□□□□ -0.58
LRP8-202ENST00000347547 TRAV12-2A0A075B6T6 113 aa11.4□□□□□ -0.58
LRP8-202ENST00000347547 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
LRP8-202ENST00000347547 USP24Q9UPU5 2620 aa11.39□□□□□ -0.59
LRP8-202ENST00000347547 ACACBO00763 2458 aa11.39□□□□□ -0.59
LRP8-202ENST00000347547 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
LRP8-202ENST00000347547 CDKN2A-AS1Q9UH64 79 aa11.39□□□□□ -0.59
LRP8-202ENST00000347547 IGHV3OR16-10A0A075B7F0 116 aa11.38□□□□□ -0.59
LRP8-202ENST00000347547 ZNF415Q09FC8 603 aa11.38□□□□□ -0.59
LRP8-202ENST00000347547 Q8N2B8 174 aa11.37□□□□□ -0.59
LRP8-202ENST00000347547 PF4V1P10720 104 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 SPTBN1Q01082 2364 aaKnown RBP11.36□□□□□ -0.59
LRP8-202ENST00000347547 A0A1W2PPR1 153 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 WIPF1O43516 503 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 EDN2P20800 178 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 LMO4P61968 165 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 SNRPD3P62318 126 aaKnown RBP11.36□□□□□ -0.59
LRP8-202ENST00000347547 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
LRP8-202ENST00000347547 ATP5J2P56134 94 aa11.35□□□□□ -0.59
LRP8-202ENST00000347547 SPINK13Q1W4C9 94 aa11.35□□□□□ -0.59
LRP8-202ENST00000347547 Q9H8V8 135 aa11.35□□□□□ -0.59
LRP8-202ENST00000347547 RPL18AQ02543 176 aaKnown RBP11.35□□□□□ -0.59
LRP8-202ENST00000347547 LINC00467Q9BRT7 94 aa11.35□□□□□ -0.59
LRP8-202ENST00000347547 K7EQG2 157 aa11.34□□□□□ -0.59
LRP8-202ENST00000347547 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
LRP8-202ENST00000347547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.34□□□□□ -0.59
LRP8-202ENST00000347547 IGKV2-29A2NJV5 120 aaPredicted RBP11.34□□□□□ -0.59
LRP8-202ENST00000347547 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms