RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 NAV2Q8IVL1 2488 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 A0A0J9YX75 114 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 TRBV12-3P01733 135 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 TLN1Q9Y490 2541 aaKnown RBP8.24□□□□□ -1.09
CLCN6-202ENST00000346436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
CLCN6-202ENST00000346436 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
CLCN6-202ENST00000346436 C9JAW5 83 aa8.24□□□□□ -1.09
CLCN6-202ENST00000346436 HIST1H4AP62805 103 aaKnown RBP8.24□□□□□ -1.09
CLCN6-202ENST00000346436 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
CLCN6-202ENST00000346436 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
CLCN6-202ENST00000346436 UNQ9165/PRO28630Q6UXU0 137 aa8.22□□□□□ -1.09
CLCN6-202ENST00000346436 DEFB105AQ8NG35 78 aa8.22□□□□□ -1.09
CLCN6-202ENST00000346436 CRYGBP07316 175 aa8.22□□□□□ -1.09
CLCN6-202ENST00000346436 UBL5Q9BZL1 73 aa8.22□□□□□ -1.09
CLCN6-202ENST00000346436 IGLV2-11P01706 119 aa8.21□□□□□ -1.09
CLCN6-202ENST00000346436 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.09
CLCN6-202ENST00000346436 ODF3Q96PU9 254 aa8.21□□□□□ -1.09
CLCN6-202ENST00000346436 Q8N1Y9 231 aa8.21□□□□□ -1.09
CLCN6-202ENST00000346436 SPINK8P0C7L1 97 aa8.21□□□□□ -1.1
CLCN6-202ENST00000346436 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
CLCN6-202ENST00000346436 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
CLCN6-202ENST00000346436 Q8N976 141 aa8.21□□□□□ -1.1
CLCN6-202ENST00000346436 ANAPC13Q9BS18 74 aa8.21□□□□□ -1.1
CLCN6-202ENST00000346436 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 M0R2N4 97 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 CCDC168Q8NDH2 2452 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 SZT2Q5T011 3432 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 IGLV2-18A0A075B6J9 118 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 A0A087WZ39 114 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 TRIOO75962 3097 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 ZNF702PQ9H963 129 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 MYO18BQ8IUG5 2567 aa8.2□□□□□ -1.1
CLCN6-202ENST00000346436 CCDC140Q96MF4 163 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
CLCN6-202ENST00000346436 FGF6P10767 208 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 CFAP54Q96N23 3096 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 OXLD1Q5BKU9 147 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 WFDC2Q14508 124 aa8.19□□□□□ -1.1
CLCN6-202ENST00000346436 SMR3AQ99954 134 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 ADAMTS20P59510 1910 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 TRANK1O15050 2925 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 CEP295Q9C0D2 2601 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 ZNF706Q9Y5V0 76 aaPredicted RBP8.18□□□□□ -1.1
CLCN6-202ENST00000346436 F8W1H4 67 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 J3QQQ9 107 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 COL4A2P08572 1712 aa8.18□□□□□ -1.1
CLCN6-202ENST00000346436 Q9H8V8 135 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 TRBV6-1A0A0K0K1D8 114 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 IGHV4-28A0A0C4DH34 117 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 HIVEP3Q5T1R4 2406 aa8.17□□□□□ -1.1
CLCN6-202ENST00000346436 LY6LH3BQJ8 138 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 K7EQG2 157 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 EBI3Q14213 229 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 IGHV1-58A0A0C4DH39 117 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 CDSNQ15517 529 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
CLCN6-202ENST00000346436 VCANP13611 3396 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 PRSS47A8MTI9 375 aa8.16□□□□□ -1.1
CLCN6-202ENST00000346436 PRB2P02812 416 aaPredicted RBP8.15□□□□□ -1.1
CLCN6-202ENST00000346436 IGLC6P0CF74 106 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 KRTAP10-9P60411 292 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 REG3AQ06141 175 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
CLCN6-202ENST00000346436 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.15□□□□□ -1.11
CLCN6-202ENST00000346436 SORL1Q92673 2214 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 H7C423 109 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 IGHV4-30-4P0DP06 118 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 RAI1Q7Z5J4 1906 aaPredicted RBP8.14□□□□□ -1.11
CLCN6-202ENST00000346436 MIAQ16674 131 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 C16orf95Q9H693 158 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 HAMPP81172 84 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
CLCN6-202ENST00000346436 WNK1Q9H4A3 2382 aa8.14□□□□□ -1.11
CLCN6-202ENST00000346436 A0A0J9YXV3 536 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 IFITM1P13164 125 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 CITED1Q99966 193 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 RNF185Q96GF1 192 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 ORMDL1Q9P0S3 153 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 MDFICQ9P1T7 246 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 A0A0J9YWU9 116 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
CLCN6-202ENST00000346436 IGHV4-4A0A075B6R2 117 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 C2orf91Q6ZV80 131 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms