RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
CDK5RAP1-202ENST00000346416 CCL25O15444 150 aa10.15□□□□□ -0.78
CDK5RAP1-202ENST00000346416 NOP10Q9NPE3 64 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP1-202ENST00000346416 INSL3P51460 131 aa10.15□□□□□ -0.79
CDK5RAP1-202ENST00000346416 C16orf74Q96GX8 76 aa10.15□□□□□ -0.79
CDK5RAP1-202ENST00000346416 ZNF479Q96JC4 524 aa10.15□□□□□ -0.79
CDK5RAP1-202ENST00000346416 CITED1Q99966 193 aa10.15□□□□□ -0.79
CDK5RAP1-202ENST00000346416 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
CDK5RAP1-202ENST00000346416 DNAJC30Q96LL9 226 aa10.14□□□□□ -0.79
CDK5RAP1-202ENST00000346416 OPRPNQ99935 248 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP1-202ENST00000346416 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 EMP1P54849 157 aa10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 DAZ2Q13117 558 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 C9orf66Q5T8R8 295 aa10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 HIGD1BQ9P298 99 aa10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 RRN3P1Q2M238 152 aa10.13□□□□□ -0.79
CDK5RAP1-202ENST00000346416 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
CDK5RAP1-202ENST00000346416 MAPKAPK5-AS1Q8N8E1 139 aa10.12□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRBV25-1A0A075B6N4 114 aa10.12□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRAV4A0A0B4J268 109 aa10.12□□□□□ -0.79
CDK5RAP1-202ENST00000346416 PAPPA-AS1Q5QFB9 102 aa10.12□□□□□ -0.79
CDK5RAP1-202ENST00000346416 IGHV3-38A0A0C4DH36 116 aa10.11□□□□□ -0.79
CDK5RAP1-202ENST00000346416 H3BRM9 83 aa10.11□□□□□ -0.79
CDK5RAP1-202ENST00000346416 OR11H2Q8NH07 326 aa10.11□□□□□ -0.79
CDK5RAP1-202ENST00000346416 PHLDA1Q8WV24 401 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRRAPQ9Y4A5 3859 aa10.11□□□□□ -0.79
CDK5RAP1-202ENST00000346416 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
CDK5RAP1-202ENST00000346416 E9PLD3 99 aa10.1□□□□□ -0.79
CDK5RAP1-202ENST00000346416 ZNRF2Q8NHG8 242 aa10.1□□□□□ -0.79
CDK5RAP1-202ENST00000346416 CHCHD7Q9BUK0 85 aa10.1□□□□□ -0.79
CDK5RAP1-202ENST00000346416 PYGO1Q9Y3Y4 419 aa10.1□□□□□ -0.79
CDK5RAP1-202ENST00000346416 NBEAL2Q6ZNJ1 2754 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 GAGE7O76087 117 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 GAGE12FP0CL80 117 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 GAGE12GP0CL81 117 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 GAGE12IP0CL82 117 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 COTL1Q14019 142 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 OVOL2Q9BRP0 275 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 CHAC1Q9BUX1 264 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 VCX2Q9H322 139 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRBV7-3A0A075B6L6 115 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 K7EQD1 137 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 AMMECR1LQ6DCA0 310 aa10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP1-202ENST00000346416 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
CDK5RAP1-202ENST00000346416 SLC25A29Q8N8R3 303 aa10.08□□□□□ -0.8
CDK5RAP1-202ENST00000346416 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
CDK5RAP1-202ENST00000346416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 TMEM170BQ5T4T1 132 aa10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 MYMXA0A1B0GTQ4 84 aa10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 RPL36AP83881 106 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 RPL36ALQ969Q0 106 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP1-202ENST00000346416 HERVK_113P61574 105 aa10.06□□□□□ -0.8
CDK5RAP1-202ENST00000346416 UBE2D4Q9Y2X8 147 aa10.06□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GCSHP23434 173 aa10.06□□□□□ -0.8
CDK5RAP1-202ENST00000346416 AMELXQ99217 191 aa10.06□□□□□ -0.8
CDK5RAP1-202ENST00000346416 SPANXA1Q9NS26 97 aa10.06□□□□□ -0.8
CDK5RAP1-202ENST00000346416 TAL2Q16559 108 aa10.05□□□□□ -0.8
CDK5RAP1-202ENST00000346416 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 K7EP13 123 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 CRYBA4P53673 196 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GTF2H5Q6ZYL4 71 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GAGE12JA6NER3 117 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 UBE2D3P61077 147 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 UBE2D2P62837 147 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GAGE4Q13068 117 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GAGE5Q13069 117 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GAGE13Q4V321 117 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
CDK5RAP1-202ENST00000346416 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 CIDEAO60543 219 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 CEND1Q8N111 149 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 H3BUT2 72 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 X6R8D5 127 aa10.03□□□□□ -0.8
CDK5RAP1-202ENST00000346416 TRBV6-4A0A1B0GX49 114 aa10.02□□□□□ -0.81
CDK5RAP1-202ENST00000346416 FXYD2P54710 66 aa10.02□□□□□ -0.81
CDK5RAP1-202ENST00000346416 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
CDK5RAP1-202ENST00000346416 Q6ZUT4 128 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 LOC100131303A0A0U1RQF7 123 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 DEFB130BP0DP73 79 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 DEFB130AP0DP74 79 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
CDK5RAP1-202ENST00000346416 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms