RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 MCRIP2Q9BUT9 160 aaKnown RBP6.75□□□□□ -1.33
ATG4A-202ENST00000345734 KIF25-AS1Q9Y6Z4 181 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 IGLV2-18A0A075B6J9 118 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 SYS1-DBNDD2H3BUS1 97 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 CRLF1O75462 422 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 LINC00315P59091 139 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 RASL10AQ92737 203 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 RPL39LQ96EH5 51 aaKnown RBP6.74□□□□□ -1.33
ATG4A-202ENST00000345734 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 LINC01546A6NGU7 62 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 ZNF747Q9BV97 191 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 CSDC2Q9Y534 153 aaKnown RBP6.74□□□□□ -1.33
ATG4A-202ENST00000345734 CMYA5Q8N3K9 4069 aa6.74□□□□□ -1.33
ATG4A-202ENST00000345734 IGLV1-51P01701 117 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 HBDP02042 147 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 Q8N8P6 123 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
ATG4A-202ENST00000345734 STHQ8IWL8 128 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 POM121L12Q8N7R1 296 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 WFDC10AQ9H1F0 79 aa6.73□□□□□ -1.33
ATG4A-202ENST00000345734 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
ATG4A-202ENST00000345734 Q6ZUT4 128 aa6.72□□□□□ -1.33
ATG4A-202ENST00000345734 TRPT1Q86TN4 253 aaKnown RBP6.72□□□□□ -1.33
ATG4A-202ENST00000345734 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
ATG4A-202ENST00000345734 BAHCC1Q9P281 2608 aa6.71□□□□□ -1.33
ATG4A-202ENST00000345734 TCTAP57738 103 aa6.71□□□□□ -1.33
ATG4A-202ENST00000345734 FAM74A4Q5TZK3 123 aa6.71□□□□□ -1.33
ATG4A-202ENST00000345734 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.33
ATG4A-202ENST00000345734 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.71□□□□□ -1.33
ATG4A-202ENST00000345734 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.33
ATG4A-202ENST00000345734 LINC01587Q99440 93 aa6.71□□□□□ -1.33
ATG4A-202ENST00000345734 INSP01308 110 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 FCER1GP30273 86 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
ATG4A-202ENST00000345734 ZNF876PQ49A33 203 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 TMEM158Q8WZ71 300 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 C18orf15Q96N68 181 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 SMIM2Q9BVW6 85 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 TM2D2Q9BX73 214 aa6.71□□□□□ -1.34
ATG4A-202ENST00000345734 F8WDY8 70 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 CRYGDP07320 174 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 LINC01545Q5VT33 79 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 SMIM9A6NGZ8 99 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 LAGE3Q14657 143 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 IFI27L1Q96BM0 104 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 DNAJC30Q96LL9 226 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 C20orf78Q9BR46 151 aa6.7□□□□□ -1.34
ATG4A-202ENST00000345734 IGHV3OR16-12A0A075B7B8 117 aa6.69□□□□□ -1.34
ATG4A-202ENST00000345734 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
ATG4A-202ENST00000345734 SMIM13P0DJ93 91 aa6.69□□□□□ -1.34
ATG4A-202ENST00000345734 C1orf158Q8N1D5 194 aa6.69□□□□□ -1.34
ATG4A-202ENST00000345734 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
ATG4A-202ENST00000345734 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-202ENST00000345734 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
ATG4A-202ENST00000345734 ZNF56Q15929 161 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 Q6Q795 121 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 C11orf72Q8NBR9 251 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 IGHV3-73A0A0B4J1V6 119 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 M0R2P5 195 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 MT-ATP8P03928 68 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 NHLRC4P0CG21 123 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-202ENST00000345734 CMC4P56277 68 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-202ENST00000345734 ZNF415Q09FC8 603 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 MORN3Q6PF18 240 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-202ENST00000345734 LINC00467Q9BRT7 94 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 PPDPFQ9H3Y8 114 aa6.68□□□□□ -1.34
ATG4A-202ENST00000345734 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 M0QY20 66 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 RHODO00212 210 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 PPP1R17O96001 155 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 FOXI1Q12951 378 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 MRAPQ8TCY5 172 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 NBEAL2Q6ZNJ1 2754 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 POLR2KP53803 58 aaKnown RBP6.67□□□□□ -1.34
ATG4A-202ENST00000345734 XGP55808 180 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 ETDBQ3ZM63 59 aa6.67□□□□□ -1.34
ATG4A-202ENST00000345734 FBN1P35555 2871 aaKnown RBP6.66□□□□□ -1.34
ATG4A-202ENST00000345734 APOMO95445 188 aa6.66□□□□□ -1.34
ATG4A-202ENST00000345734 FGF6P10767 208 aa6.66□□□□□ -1.34
ATG4A-202ENST00000345734 WFDC2Q14508 124 aa6.66□□□□□ -1.34
ATG4A-202ENST00000345734 LGALS9BQ3B8N2 356 aa6.66□□□□□ -1.34
ATG4A-202ENST00000345734 LGALS9CQ6DKI2 356 aa6.66□□□□□ -1.34
ATG4A-202ENST00000345734 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
ATG4A-202ENST00000345734 SDHAF1A6NFY7 115 aa6.65□□□□□ -1.34
ATG4A-202ENST00000345734 H3BMG7 143 aa6.65□□□□□ -1.34
ATG4A-202ENST00000345734 P0DMU3 169 aa6.65□□□□□ -1.34
ATG4A-202ENST00000345734 FAM231AP0DMU4 169 aa6.65□□□□□ -1.34
ATG4A-202ENST00000345734 FAM231CP0DMU5 169 aa6.65□□□□□ -1.34
ATG4A-202ENST00000345734 NDUFV3P56181 108 aaKnown RBP6.65□□□□□ -1.34
ATG4A-202ENST00000345734 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.34
ATG4A-202ENST00000345734 TRBV6-5A0A0K0K1A5 114 aa6.65□□□□□ -1.35
ATG4A-202ENST00000345734 CYSRT1A8MQ03 144 aa6.65□□□□□ -1.35
ATG4A-202ENST00000345734 E9PLD3 99 aa6.65□□□□□ -1.35
ATG4A-202ENST00000345734 PRSS1P07477 247 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms