RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
HMGN3-202ENST00000344726 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
HMGN3-202ENST00000344726 A8MWL6 223 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 CRPP02741 224 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 PKIAP61925 76 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 CT83Q5H943 113 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 CLPSL2Q6UWE3 100 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 C1orf43Q9BWL3 253 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
HMGN3-202ENST00000344726 ZNF727A8MUV8 499 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 C9JQL5 133 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 EIF4EBP3O60516 100 aaPredicted RBP9.44□□□□□ -0.9
HMGN3-202ENST00000344726 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 KRTAP26-1Q6PEX3 210 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 Q6ZSA8 131 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 LINC00269Q8N2A0 174 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 FRZBQ92765 325 aa9.44□□□□□ -0.9
HMGN3-202ENST00000344726 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
HMGN3-202ENST00000344726 MIAQ16674 131 aa9.43□□□□□ -0.9
HMGN3-202ENST00000344726 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
HMGN3-202ENST00000344726 TMEM243Q9BU79 118 aa9.43□□□□□ -0.9
HMGN3-202ENST00000344726 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
HMGN3-202ENST00000344726 IGLV4-60A0A075B6I1 120 aa9.42□□□□□ -0.9
HMGN3-202ENST00000344726 SRSF3P84103 164 aaKnown RBP9.42□□□□□ -0.9
HMGN3-202ENST00000344726 TEX261Q6UWH6 196 aa9.42□□□□□ -0.9
HMGN3-202ENST00000344726 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
HMGN3-202ENST00000344726 OSTCQ9NRP0 149 aa9.42□□□□□ -0.9
HMGN3-202ENST00000344726 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
HMGN3-202ENST00000344726 HIGD1CA8MV81 97 aa9.41□□□□□ -0.9
HMGN3-202ENST00000344726 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
HMGN3-202ENST00000344726 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
HMGN3-202ENST00000344726 V9GYV3 84 aa9.41□□□□□ -0.9
HMGN3-202ENST00000344726 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
HMGN3-202ENST00000344726 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
HMGN3-202ENST00000344726 RPL23P62829 140 aaKnown RBP9.4□□□□□ -0.9
HMGN3-202ENST00000344726 REG3AQ06141 175 aa9.4□□□□□ -0.9
HMGN3-202ENST00000344726 COTL1Q14019 142 aa9.4□□□□□ -0.9
HMGN3-202ENST00000344726 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
HMGN3-202ENST00000344726 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
HMGN3-202ENST00000344726 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
HMGN3-202ENST00000344726 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
HMGN3-202ENST00000344726 AMTP48728 403 aa9.39□□□□□ -0.91
HMGN3-202ENST00000344726 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
HMGN3-202ENST00000344726 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
HMGN3-202ENST00000344726 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
HMGN3-202ENST00000344726 PRSS1P07477 247 aa9.38□□□□□ -0.91
HMGN3-202ENST00000344726 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
HMGN3-202ENST00000344726 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
HMGN3-202ENST00000344726 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
HMGN3-202ENST00000344726 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
HMGN3-202ENST00000344726 UBE2L6O14933 153 aa9.37□□□□□ -0.91
HMGN3-202ENST00000344726 C14orf177Q52M58 125 aa9.37□□□□□ -0.91
HMGN3-202ENST00000344726 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
HMGN3-202ENST00000344726 BORCS7Q96B45 105 aa9.37□□□□□ -0.91
HMGN3-202ENST00000344726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
HMGN3-202ENST00000344726 TRBV6-5A0A0K0K1A5 114 aa9.36□□□□□ -0.91
HMGN3-202ENST00000344726 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
HMGN3-202ENST00000344726 RAB4AP20338 218 aa9.36□□□□□ -0.91
HMGN3-202ENST00000344726 RPS10P46783 165 aaKnown RBP9.36□□□□□ -0.91
HMGN3-202ENST00000344726 ADIRFQ15847 76 aa9.36□□□□□ -0.91
HMGN3-202ENST00000344726 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
HMGN3-202ENST00000344726 NAT8Q9UHE5 227 aa9.36□□□□□ -0.91
HMGN3-202ENST00000344726 NCR2O95944 276 aa9.35□□□□□ -0.91
HMGN3-202ENST00000344726 PEA15Q15121 130 aa9.35□□□□□ -0.91
HMGN3-202ENST00000344726 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
HMGN3-202ENST00000344726 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
HMGN3-202ENST00000344726 APCSP02743 223 aa9.34□□□□□ -0.91
HMGN3-202ENST00000344726 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
HMGN3-202ENST00000344726 I3L3M4 83 aa9.33□□□□□ -0.92
HMGN3-202ENST00000344726 TSHBP01222 138 aa9.33□□□□□ -0.92
HMGN3-202ENST00000344726 POLR2KP53803 58 aaKnown RBP9.33□□□□□ -0.92
HMGN3-202ENST00000344726 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
HMGN3-202ENST00000344726 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
HMGN3-202ENST00000344726 NAT8BQ9UHF3 227 aa9.33□□□□□ -0.92
HMGN3-202ENST00000344726 LRP1Q07954 4544 aaKnown RBP9.32□□□□□ -0.92
HMGN3-202ENST00000344726 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
HMGN3-202ENST00000344726 PMCHP20382 165 aa9.32□□□□□ -0.92
HMGN3-202ENST00000344726 KRTAP10-4P60372 401 aaPredicted RBP9.32□□□□□ -0.92
HMGN3-202ENST00000344726 RIGQ13278 110 aa9.32□□□□□ -0.92
HMGN3-202ENST00000344726 MRAP2Q96G30 205 aa9.32□□□□□ -0.92
HMGN3-202ENST00000344726 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
HMGN3-202ENST00000344726 TMEM242Q9NWH2 141 aa9.32□□□□□ -0.92
HMGN3-202ENST00000344726 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 H7C423 109 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 FGF6P10767 208 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 ESDP10768 282 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 AMMECR1LQ6DCA0 310 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
HMGN3-202ENST00000344726 NRACQ8N912 160 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
HMGN3-202ENST00000344726 PKHD1L1Q86WI1 4243 aa9.3□□□□□ -0.92
HMGN3-202ENST00000344726 TRBV27A0A0K0K1C4 114 aa9.3□□□□□ -0.92
HMGN3-202ENST00000344726 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
HMGN3-202ENST00000344726 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
HMGN3-202ENST00000344726 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
HMGN3-202ENST00000344726 GAGE12HA6NDE8 117 aa9.29□□□□□ -0.92
HMGN3-202ENST00000344726 SLPIP03973 132 aa9.29□□□□□ -0.92
HMGN3-202ENST00000344726 MRPL51Q4U2R6 128 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms