RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 KIAA0087Q14695 138 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 Q8N3U1 123 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 C2orf48Q96LS8 159 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3OR16-13A0A075B7E8 117 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 EPOPA6NHQ4 379 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 Q6ZQT7 251 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 ITLN1Q8WWA0 313 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 UQCR11O14957 56 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 TRGV1A0A0A0MS02 117 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 URB1-AS1Q96HZ7 61 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 OBSCN-AS1Q96MR7 158 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 Q8TAT8 98 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 C16orf74Q96GX8 76 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 COL11A1P12107 1806 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-202ENST00000344113 ZNF106Q9H2Y7 1883 aaKnown RBP2.83□□□□□ -1.96
SYNE2-202ENST00000344113 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 LINC00308Q8TCZ7 52 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 NRAPQ86VF7 1730 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 APELAP0DMC3 54 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV2D-26A0A0A0MRZ7 120 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3-21A0A0B4J1V1 117 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1-39P01597 117 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1D-39P04432 117 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 C9orf116Q5BN46 136 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-202ENST00000344113 ADAMTSL1Q8N6G6 1762 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 TCF20Q9UGU0 1960 aaKnown RBP2.82□□□□□ -1.96
SYNE2-202ENST00000344113 THSD7AQ9UPZ6 1657 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 E7EQL1 145 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 H0Y9J4 135 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 H0Y9P7 68 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 X6R8D5 127 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV1-3A0A0C4DH29 117 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 ACYP2P14621 99 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 ANAPC1Q9H1A4 1944 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGLV3-12A0A075B6K2 115 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3OR16-9A0A0B4J2B5 98 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 ZNF706Q9Y5V0 76 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-202ENST00000344113 C14orf177Q52M58 125 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 Q5XG85 94 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 H7BZZ5 65 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 PRB3Q04118 309 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-202ENST00000344113 Q9UF83 564 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3-48P01763 117 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
SYNE2-202ENST00000344113 GRNP28799 593 aaKnown RBP2.81□□□□□ -1.96
SYNE2-202ENST00000344113 SEC61BP60468 96 aaKnown RBP2.81□□□□□ -1.96
SYNE2-202ENST00000344113 CCL14Q16627 93 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1-6A0A0C4DH72 117 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 A0A1B0GU69 56 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1-12A0A0C4DH73 117 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1D-12P01611 117 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 PTPRBP23467 1997 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 BUB1B-PAK6H3BSN5 160 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 SRRM5B3KS81 715 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 MDFIQ99750 246 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 TTTY12Q9BZ98 90 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV5-10-1A0A0J9YXX1 117 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 H0Y8X5 98 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 PATE4P0C8F1 98 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 LINC01561Q8N1V8 128 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 LOC110117498A0A087WWA1 95 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 ITLN2Q8WWU7 325 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-202ENST00000344113 ANKRD17O75179 2603 aaKnown RBP2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3-73A0A0B4J1V6 119 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 GDF5OSQ5U4N7 250 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 Q8N814 137 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 LINC01560Q8TB33 94 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 LOC285556D6RIA3 1793 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 TFF1P04155 84 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 RSPO1Q2MKA7 263 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-202ENST00000344113 Q6ZR03 302 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 TM2D3Q9BRN9 247 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV3-7A0A075B6H7 116 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 H3BS24 57 aa2.81□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV3-66A0A0C4DH42 116 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 PSPNO60542 156 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 LINC01547P58512 204 aaPredicted RBP2.8□□□□□ -1.96
SYNE2-202ENST00000344113 ZNF883P0CG24 379 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 CCL26Q9Y258 94 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 A0A0G2JRQ6 117 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 TSC2P49815 1807 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 RPL37AP8A6NKH3 93 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 ATP6V0E1O15342 81 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 PSMG3-AS1Q96PY0 264 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 BPTFQ12830 3046 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 MRGPRG-AS1Q2M3A8 158 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 PIP4P2Q8N4L2 257 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 A0A096LNJ9 63 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 VWA8A3KMH1 1905 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 IGHV7-81A0A0B4J1V7 117 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 SIGLEC1Q9BZZ2 1709 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 K7EQD1 137 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 SAP25Q8TEE9 199 aa2.8□□□□□ -1.96
SYNE2-202ENST00000344113 LOC101927531A0A1B0GV80 90 aa2.79□□□□□ -1.96
SYNE2-202ENST00000344113 ANGP03950 147 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms