RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 IGLL5B9A064 214 aa7.13□□□□□ -1.27
CLDN18-202ENST00000343735 H7C2G1 150 aa7.13□□□□□ -1.27
CLDN18-202ENST00000343735 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
CLDN18-202ENST00000343735 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
CLDN18-202ENST00000343735 APOC4P55056 127 aa7.13□□□□□ -1.27
CLDN18-202ENST00000343735 NPC2P61916 151 aa7.13□□□□□ -1.27
CLDN18-202ENST00000343735 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
CLDN18-202ENST00000343735 A0A1B0GW15 77 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 KIR2DL5BQ8NHK3 375 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
CLDN18-202ENST00000343735 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 IGHV1OR15-1A0A075B7D0 117 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 RBMY1BA6NDE4 496 aaKnown RBP7.12□□□□□ -1.27
CLDN18-202ENST00000343735 RBMY1EA6NEQ0 496 aaKnown RBP7.12□□□□□ -1.27
CLDN18-202ENST00000343735 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 RBMY1DP0C7P1 496 aaKnown RBP7.12□□□□□ -1.27
CLDN18-202ENST00000343735 MED14OSP0DP75 135 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 Q8N1Y9 231 aa7.12□□□□□ -1.27
CLDN18-202ENST00000343735 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
CLDN18-202ENST00000343735 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
CLDN18-202ENST00000343735 SCGB3A1Q96QR1 104 aa7.11□□□□□ -1.27
CLDN18-202ENST00000343735 APOMO95445 188 aa7.11□□□□□ -1.27
CLDN18-202ENST00000343735 COL6A5A8TX70 2615 aa7.11□□□□□ -1.27
CLDN18-202ENST00000343735 LINC01587Q99440 93 aa7.11□□□□□ -1.27
CLDN18-202ENST00000343735 A8MZ25 164 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 IGLC6P0CF74 106 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 XGP55808 180 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 ZNF876PQ49A33 203 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 B5MCH6 92 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 C12orf74Q32Q52 190 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 NFE4Q86UQ8 179 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 HIST1H4GQ99525 98 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 J3QR89 54 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 CEND1Q8N111 149 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 KIR2DL4Q99706 377 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 MRPL16Q9NX20 251 aaKnown RBP7.1□□□□□ -1.27
CLDN18-202ENST00000343735 HHLA3Q9XRX5 114 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
CLDN18-202ENST00000343735 LOC107984156A0A0G2JMH3 177 aa7.09□□□□□ -1.27
CLDN18-202ENST00000343735 ARL17AQ8IVW1 177 aa7.09□□□□□ -1.27
CLDN18-202ENST00000343735 GATD1Q8NB37 220 aa7.09□□□□□ -1.27
CLDN18-202ENST00000343735 E9PLD3 99 aa7.09□□□□□ -1.27
CLDN18-202ENST00000343735 CDIP1Q9H305 208 aa7.09□□□□□ -1.27
CLDN18-202ENST00000343735 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
CLDN18-202ENST00000343735 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 DEFB4AO15263 64 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 IGHV4-30-4P0DP06 118 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 PSMB2P49721 201 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
CLDN18-202ENST00000343735 SCGB1D4Q6XE38 83 aa7.08□□□□□ -1.28
CLDN18-202ENST00000343735 F8W1H4 67 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 ZNF415Q09FC8 603 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 ZNF493Q6ZR52 646 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 CNFNQ9BYD5 112 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 TRBV20-1A0A075B6N2 111 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 SMIM9A6NGZ8 99 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 IGKCP01834 107 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 RNASE3P12724 160 aaKnown RBP7.07□□□□□ -1.28
CLDN18-202ENST00000343735 KPRPQ5T749 579 aaPredicted RBP7.07□□□□□ -1.28
CLDN18-202ENST00000343735 PRO0461Q9UI25 63 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 A0A096LPF7 62 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 LAGE3Q14657 143 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 C2orf66Q6UXQ4 117 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 RASL10AQ92737 203 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
CLDN18-202ENST00000343735 SUMO2P61956 95 aaKnown RBP7.06□□□□□ -1.28
CLDN18-202ENST00000343735 FOXI1Q12951 378 aa7.06□□□□□ -1.28
CLDN18-202ENST00000343735 C1orf158Q8N1D5 194 aa7.06□□□□□ -1.28
CLDN18-202ENST00000343735 ZNF625Q96I27 306 aaPredicted RBP7.06□□□□□ -1.28
CLDN18-202ENST00000343735 SIVA1O15304 175 aa7.06□□□□□ -1.28
CLDN18-202ENST00000343735 CSNK1G2-AS1Q8NCQ2 148 aa7.06□□□□□ -1.28
CLDN18-202ENST00000343735 GIG44P09565 113 aaPredicted RBP7.05□□□□□ -1.28
CLDN18-202ENST00000343735 RBMY1A1P0DJD3 496 aaKnown RBP7.05□□□□□ -1.28
CLDN18-202ENST00000343735 RBMY1CP0DJD4 496 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 RBMY1FQ15415 496 aaKnown RBP7.05□□□□□ -1.28
CLDN18-202ENST00000343735 PIK3CD-AS1Q5SR53 167 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 RRN3P1Q2M238 152 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 SUMO4Q6EEV6 95 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 Q6ZUT4 128 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 TMEM263Q8WUH6 116 aaKnown RBP7.05□□□□□ -1.28
CLDN18-202ENST00000343735 C9orf85Q96MD7 179 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
CLDN18-202ENST00000343735 LINC01549A6NIU2 74 aa7.04□□□□□ -1.28
CLDN18-202ENST00000343735 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
CLDN18-202ENST00000343735 TRRAPQ9Y4A5 3859 aa7.04□□□□□ -1.28
CLDN18-202ENST00000343735 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.04□□□□□ -1.28
CLDN18-202ENST00000343735 IGKV2-29A2NJV5 120 aaPredicted RBP7.04□□□□□ -1.28
CLDN18-202ENST00000343735 HERV-K104P63124 156 aa7.04□□□□□ -1.28
CLDN18-202ENST00000343735 SRSF9Q13242 221 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLDN18-202ENST00000343735 SMIM2Q9BVW6 85 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms