RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
CDHR4-201ENST00000343366 TRBV27A0A0K0K1C4 114 aa12.81□□□□□ -0.36
CDHR4-201ENST00000343366 VCYO14598 125 aa12.81□□□□□ -0.36
CDHR4-201ENST00000343366 NRACQ8N912 160 aa12.81□□□□□ -0.36
CDHR4-201ENST00000343366 PRELID3AQ96N28 172 aa12.81□□□□□ -0.36
CDHR4-201ENST00000343366 TMEM70Q9BUB7 260 aa12.81□□□□□ -0.36
CDHR4-201ENST00000343366 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 TNFRSF6BO95407 300 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 PMCHP20382 165 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 POLR2KP53803 58 aaKnown RBP12.8□□□□□ -0.36
CDHR4-201ENST00000343366 IQCJQ1A5X6 159 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 KIR2DL4Q99706 377 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 CHCHD7Q9BUK0 85 aa12.8□□□□□ -0.36
CDHR4-201ENST00000343366 TGIF2-C20orf24A0A0A6YYL0 155 aa12.79□□□□□ -0.36
CDHR4-201ENST00000343366 SMKR1H3BMG3 65 aa12.79□□□□□ -0.36
CDHR4-201ENST00000343366 DNAH10OSP0CZ25 163 aa12.79□□□□□ -0.36
CDHR4-201ENST00000343366 BTF3P20290 206 aaKnown RBP12.79□□□□□ -0.36
CDHR4-201ENST00000343366 RPS10P46783 165 aaKnown RBP12.79□□□□□ -0.36
CDHR4-201ENST00000343366 C10orf126Q8N4M7 172 aa12.79□□□□□ -0.36
CDHR4-201ENST00000343366 HERC1Q15751 4861 aa12.78□□□□□ -0.36
CDHR4-201ENST00000343366 PRSS47A8MTI9 375 aa12.78□□□□□ -0.36
CDHR4-201ENST00000343366 YPEL4Q96NS1 127 aa12.78□□□□□ -0.36
CDHR4-201ENST00000343366 LINC01556Q5JQF7 62 aa12.77□□□□□ -0.37
CDHR4-201ENST00000343366 CBLN2Q8IUK8 224 aa12.77□□□□□ -0.37
CDHR4-201ENST00000343366 MRPL18Q9H0U6 180 aaKnown RBP12.77□□□□□ -0.37
CDHR4-201ENST00000343366 TRAPPC1Q9Y5R8 145 aa12.77□□□□□ -0.37
CDHR4-201ENST00000343366 LRP1BQ9NZR2 4599 aa12.76□□□□□ -0.37
CDHR4-201ENST00000343366 H7C423 109 aa12.76□□□□□ -0.37
CDHR4-201ENST00000343366 GAS8-AS1O95177 125 aa12.76□□□□□ -0.37
CDHR4-201ENST00000343366 FABP9Q0Z7S8 132 aa12.76□□□□□ -0.37
CDHR4-201ENST00000343366 TMEM243Q9BU79 118 aa12.76□□□□□ -0.37
CDHR4-201ENST00000343366 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
CDHR4-201ENST00000343366 K7EMI3 77 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 RTL8CO15255 209 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 NPYP01303 97 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 FCER1GP30273 86 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 AMTP48728 403 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 SMAGPQ0VAQ4 97 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 NTM-AS1Q6ZSK4 140 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 WFDC10BQ8IUB3 73 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 CHCHD5Q9BSY4 110 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 SMIM2Q9BVW6 85 aa12.75□□□□□ -0.37
CDHR4-201ENST00000343366 A0A087WX48 190 aa12.74□□□□□ -0.37
CDHR4-201ENST00000343366 NBDYA0A0U1RRE5 68 aa12.74□□□□□ -0.37
CDHR4-201ENST00000343366 UBE2L6O14933 153 aa12.74□□□□□ -0.37
CDHR4-201ENST00000343366 NIT1Q86X76 327 aa12.74□□□□□ -0.37
CDHR4-201ENST00000343366 ATP6V1G1O75348 118 aa12.73□□□□□ -0.37
CDHR4-201ENST00000343366 TMEM18Q96B42 140 aa12.73□□□□□ -0.37
CDHR4-201ENST00000343366 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
CDHR4-201ENST00000343366 RAB5AP20339 215 aa12.72□□□□□ -0.37
CDHR4-201ENST00000343366 TMEM262E9PQX1 116 aa12.71□□□□□ -0.37
CDHR4-201ENST00000343366 KIAA1644Q3SXP7 199 aa12.71□□□□□ -0.37
CDHR4-201ENST00000343366 Q6ZR54 194 aa12.71□□□□□ -0.37
CDHR4-201ENST00000343366 ALKBH7Q9BT30 221 aaPredicted RBP12.71□□□□□ -0.37
CDHR4-201ENST00000343366 IGLV2-18A0A075B6J9 118 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 A0A1B0GUV1 79 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 PRSS29PA6NIE9 313 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 TSHBP01222 138 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 G0S2P27469 103 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 LAGE3Q14657 143 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 Q8N8P6 123 aa12.7□□□□□ -0.38
CDHR4-201ENST00000343366 APOBP04114 4563 aaKnown RBP12.7□□□□□ -0.38
CDHR4-201ENST00000343366 ESDP10768 282 aa12.69□□□□□ -0.38
CDHR4-201ENST00000343366 ZNF25P17030 456 aaPredicted RBP12.69□□□□□ -0.38
CDHR4-201ENST00000343366 NFE4Q86UQ8 179 aa12.68□□□□□ -0.38
CDHR4-201ENST00000343366 COLCA2A8K830 154 aa12.67□□□□□ -0.38
CDHR4-201ENST00000343366 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
CDHR4-201ENST00000343366 ORMDL2Q53FV1 153 aa12.67□□□□□ -0.38
CDHR4-201ENST00000343366 LOC389332A0A1B0GUA5 103 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 IGHV3-30-3P0DP02 117 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 Q0VG73 95 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 GAGE6Q13070 117 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 PRSS3P2Q8NHM4 247 aa12.66□□□□□ -0.38
CDHR4-201ENST00000343366 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
CDHR4-201ENST00000343366 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
CDHR4-201ENST00000343366 M0R2N4 97 aa12.65□□□□□ -0.38
CDHR4-201ENST00000343366 C1orf134Q5TEV5 83 aa12.65□□□□□ -0.38
CDHR4-201ENST00000343366 MRPL52Q86TS9 123 aaKnown RBP12.65□□□□□ -0.38
CDHR4-201ENST00000343366 TMEM101Q96IK0 257 aa12.65□□□□□ -0.38
CDHR4-201ENST00000343366 RAB5BP61020 215 aa12.64□□□□□ -0.39
CDHR4-201ENST00000343366 RBX1P62877 108 aa12.64□□□□□ -0.39
CDHR4-201ENST00000343366 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
CDHR4-201ENST00000343366 C6orf223Q8N319 242 aa12.64□□□□□ -0.39
CDHR4-201ENST00000343366 C20orf203Q8NBC4 194 aa12.64□□□□□ -0.39
CDHR4-201ENST00000343366 CSDC2Q9Y534 153 aaKnown RBP12.64□□□□□ -0.39
CDHR4-201ENST00000343366 SCO1O75880 301 aa12.63□□□□□ -0.39
CDHR4-201ENST00000343366 ANGP03950 147 aaKnown RBP12.63□□□□□ -0.39
CDHR4-201ENST00000343366 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
CDHR4-201ENST00000343366 RMI2Q96E14 147 aa12.63□□□□□ -0.39
CDHR4-201ENST00000343366 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
CDHR4-201ENST00000343366 COX11Q9Y6N1 276 aa12.63□□□□□ -0.39
CDHR4-201ENST00000343366 CRPP02741 224 aa12.62□□□□□ -0.39
CDHR4-201ENST00000343366 FGF6P10767 208 aa12.62□□□□□ -0.39
CDHR4-201ENST00000343366 DEFB104AQ8WTQ1 72 aa12.62□□□□□ -0.39
CDHR4-201ENST00000343366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms