RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
MUC1-204ENST00000343256 NKX6-2Q9C056 277 aaPredicted RBP10.63□□□□□ -0.71
MUC1-204ENST00000343256 CRCT1Q9UGL9 99 aa10.63□□□□□ -0.71
MUC1-204ENST00000343256 IGHV1-58A0A0C4DH39 117 aa10.62□□□□□ -0.71
MUC1-204ENST00000343256 KRTAP1-4P0C5Y4 121 aa10.62□□□□□ -0.71
MUC1-204ENST00000343256 AKR1C3P42330 323 aa10.62□□□□□ -0.71
MUC1-204ENST00000343256 COTL1Q14019 142 aa10.62□□□□□ -0.71
MUC1-204ENST00000343256 RASL11AQ6T310 242 aa10.62□□□□□ -0.71
MUC1-204ENST00000343256 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
MUC1-204ENST00000343256 CTXND1A0A1B0GTU2 59 aa10.61□□□□□ -0.71
MUC1-204ENST00000343256 BCL2P10415 239 aa10.61□□□□□ -0.71
MUC1-204ENST00000343256 AMMECR1LQ6DCA0 310 aa10.61□□□□□ -0.71
MUC1-204ENST00000343256 ENKURQ8TC29 256 aa10.61□□□□□ -0.71
MUC1-204ENST00000343256 CCDC32Q9BV29 185 aa10.61□□□□□ -0.71
MUC1-204ENST00000343256 MUC17Q685J3 4493 aa10.6□□□□□ -0.71
MUC1-204ENST00000343256 SSNA1O43805 119 aa10.6□□□□□ -0.71
MUC1-204ENST00000343256 UBE2D1P51668 147 aa10.6□□□□□ -0.71
MUC1-204ENST00000343256 RNASEKQ6P5S7 137 aaKnown RBP10.6□□□□□ -0.71
MUC1-204ENST00000343256 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
MUC1-204ENST00000343256 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
MUC1-204ENST00000343256 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
MUC1-204ENST00000343256 TSPAN13O95857 204 aa10.59□□□□□ -0.71
MUC1-204ENST00000343256 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
MUC1-204ENST00000343256 NIT2Q9NQR4 276 aa10.59□□□□□ -0.71
MUC1-204ENST00000343256 INMT-MINDY4F8WBC2 141 aa10.58□□□□□ -0.72
MUC1-204ENST00000343256 CCL25O15444 150 aa10.58□□□□□ -0.72
MUC1-204ENST00000343256 CST9LP1Q5W188 147 aa10.58□□□□□ -0.72
MUC1-204ENST00000343256 KRTAP11-1Q8IUC1 163 aa10.58□□□□□ -0.72
MUC1-204ENST00000343256 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
MUC1-204ENST00000343256 TRAV1-1A0A0B4J248 108 aa10.57□□□□□ -0.72
MUC1-204ENST00000343256 CAMPP49913 170 aa10.57□□□□□ -0.72
MUC1-204ENST00000343256 EIF5AP63241 154 aaKnown RBP10.57□□□□□ -0.72
MUC1-204ENST00000343256 LCE2DQ5TA82 110 aaPredicted RBP10.56□□□□□ -0.72
MUC1-204ENST00000343256 Q6ZNX1 250 aa10.56□□□□□ -0.72
MUC1-204ENST00000343256 IGLV4-69A0A075B6H9 119 aa10.55□□□□□ -0.72
MUC1-204ENST00000343256 A0A087WZ39 114 aa10.55□□□□□ -0.72
MUC1-204ENST00000343256 FGF6P10767 208 aa10.55□□□□□ -0.72
MUC1-204ENST00000343256 RPL18AQ02543 176 aaKnown RBP10.55□□□□□ -0.72
MUC1-204ENST00000343256 OR5A1Q8NGJ0 315 aa10.55□□□□□ -0.72
MUC1-204ENST00000343256 MLST8Q9BVC4 326 aa10.55□□□□□ -0.72
MUC1-204ENST00000343256 MED28Q9H204 178 aa10.55□□□□□ -0.72
MUC1-204ENST00000343256 LINC00959A0A1B0GUT2 108 aa10.54□□□□□ -0.72
MUC1-204ENST00000343256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
MUC1-204ENST00000343256 NTF3P20783 257 aa10.54□□□□□ -0.72
MUC1-204ENST00000343256 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
MUC1-204ENST00000343256 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
MUC1-204ENST00000343256 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
MUC1-204ENST00000343256 DEFA1P59665 94 aa10.53□□□□□ -0.72
MUC1-204ENST00000343256 RPL7L1Q6DKI1 246 aaKnown RBP10.53□□□□□ -0.72
MUC1-204ENST00000343256 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
MUC1-204ENST00000343256 ISOC2Q96AB3 205 aa10.53□□□□□ -0.72
MUC1-204ENST00000343256 MAP1LC3B2A6NCE7 125 aa10.52□□□□□ -0.73
MUC1-204ENST00000343256 APOMO95445 188 aa10.52□□□□□ -0.73
MUC1-204ENST00000343256 FHITP49789 147 aa10.52□□□□□ -0.73
MUC1-204ENST00000343256 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
MUC1-204ENST00000343256 MAP1LC3BQ9GZQ8 125 aa10.52□□□□□ -0.73
MUC1-204ENST00000343256 SCO2A0A1W2PP80 73 aa10.51□□□□□ -0.73
MUC1-204ENST00000343256 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
MUC1-204ENST00000343256 CAMK2N2Q96S95 79 aa10.51□□□□□ -0.73
MUC1-204ENST00000343256 OPRPNQ99935 248 aaPredicted RBP10.51□□□□□ -0.73
MUC1-204ENST00000343256 PAGE4O60829 102 aa10.5□□□□□ -0.73
MUC1-204ENST00000343256 FAM168BA1KXE4 195 aa10.49□□□□□ -0.73
MUC1-204ENST00000343256 APCSP02743 223 aa10.49□□□□□ -0.73
MUC1-204ENST00000343256 AKR1C8PQ5T2L2 129 aa10.49□□□□□ -0.73
MUC1-204ENST00000343256 H7C423 109 aa10.48□□□□□ -0.73
MUC1-204ENST00000343256 S100A9P06702 114 aaKnown RBP10.48□□□□□ -0.73
MUC1-204ENST00000343256 SS18Q15532 418 aa10.48□□□□□ -0.73
MUC1-204ENST00000343256 CD164L2Q6UWJ8 174 aa10.48□□□□□ -0.73
MUC1-204ENST00000343256 GATD1Q8NB37 220 aa10.48□□□□□ -0.73
MUC1-204ENST00000343256 MARVELD1Q9BSK0 173 aa10.48□□□□□ -0.73
MUC1-204ENST00000343256 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
MUC1-204ENST00000343256 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
MUC1-204ENST00000343256 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
MUC1-204ENST00000343256 BTF3L4Q96K17 158 aa10.47□□□□□ -0.73
MUC1-204ENST00000343256 NCR2O95944 276 aa10.46□□□□□ -0.73
MUC1-204ENST00000343256 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
MUC1-204ENST00000343256 IFITM3Q01628 133 aa10.46□□□□□ -0.73
MUC1-204ENST00000343256 TMEM101Q96IK0 257 aa10.46□□□□□ -0.73
MUC1-204ENST00000343256 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
MUC1-204ENST00000343256 BCL2L11O43521 198 aa10.45□□□□□ -0.74
MUC1-204ENST00000343256 MALP21145 153 aa10.45□□□□□ -0.74
MUC1-204ENST00000343256 BORCS7-ASMTA0A0B4J1R7 106 aa10.44□□□□□ -0.74
MUC1-204ENST00000343256 Q5BKY6 102 aa10.44□□□□□ -0.74
MUC1-204ENST00000343256 LYZL1Q6UWQ5 148 aa10.44□□□□□ -0.74
MUC1-204ENST00000343256 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
MUC1-204ENST00000343256 CARHSP1Q9Y2V2 147 aaKnown RBP10.44□□□□□ -0.74
MUC1-204ENST00000343256 A0A1B0GV50 99 aa10.43□□□□□ -0.74
MUC1-204ENST00000343256 UPK1BO75841 260 aa10.43□□□□□ -0.74
MUC1-204ENST00000343256 EIF5AL1Q6IS14 154 aaKnown RBP10.43□□□□□ -0.74
MUC1-204ENST00000343256 RETNLBQ9BQ08 111 aa10.43□□□□□ -0.74
MUC1-204ENST00000343256 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
MUC1-204ENST00000343256 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
MUC1-204ENST00000343256 TSKUQ8WUA8 353 aa10.42□□□□□ -0.74
MUC1-204ENST00000343256 CDIP1Q9H305 208 aa10.42□□□□□ -0.74
MUC1-204ENST00000343256 COX7A2LO14548 114 aa10.41□□□□□ -0.74
MUC1-204ENST00000343256 C2orf48Q96LS8 159 aa10.41□□□□□ -0.74
MUC1-204ENST00000343256 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
MUC1-204ENST00000343256 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
MUC1-204ENST00000343256 F2Z2F3 143 aa10.4□□□□□ -0.74
MUC1-204ENST00000343256 RPL35P42766 123 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms