RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 HIGD1BQ9P298 99 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 GAGE4Q13068 117 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 GAGE5Q13069 117 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 RNF183Q96D59 192 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 STHQ8IWL8 128 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 NBEAL1Q6ZS30 2694 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 A0A096LPF7 62 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 F8P00451 2351 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 I3L3M4 83 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 TSHBP01222 138 aa9.3□□□□□ -0.92
LMX1A-202ENST00000342310 NDUFA7O95182 113 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
LMX1A-202ENST00000342310 XGP55808 180 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 NFE4Q86UQ8 179 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 SLC25A20O43772 301 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
LMX1A-202ENST00000342310 SOCS3O14543 225 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 CRYGDP07320 174 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 GATA3P23771 443 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 MORN3Q6PF18 240 aaPredicted RBP9.28□□□□□ -0.92
LMX1A-202ENST00000342310 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 PSMG3-AS1Q96PY0 264 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 ZMAT4Q9H898 229 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 APCP25054 2843 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 ZFAND6Q6FIF0 208 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 VPREB3Q9UKI3 123 aa9.28□□□□□ -0.92
LMX1A-202ENST00000342310 TRGV11A0A075B6L2 103 aa9.27□□□□□ -0.92
LMX1A-202ENST00000342310 A0A0J9YY99 117 aa9.27□□□□□ -0.92
LMX1A-202ENST00000342310 M0QY20 66 aa9.27□□□□□ -0.92
LMX1A-202ENST00000342310 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 PSMB8P28062 276 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 TRAV12-1A0A0B4J245 112 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 DEFB130BP0DP73 79 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 DEFB130AP0DP74 79 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 PAPPA-AS1Q5QFB9 102 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 PPDPFLQ8WWR9 84 aa9.27□□□□□ -0.93
LMX1A-202ENST00000342310 GAGE7O76087 117 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 PLA2G2AP14555 144 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 NDUFA11Q86Y39 141 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 PRORYQ9H606 182 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 KLLNB2CW77 178 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 TMEM262E9PQX1 116 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 K7EQG2 157 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
LMX1A-202ENST00000342310 CLPSL2Q6UWE3 100 aa9.26□□□□□ -0.93
LMX1A-202ENST00000342310 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 Q6ZUT4 128 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 C20orf203Q8NBC4 194 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 CLEC2BQ92478 149 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 CFC1BP0CG36 223 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 CFC1P0CG37 223 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 Q6ZSN1 163 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 UBE2L6O14933 153 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
LMX1A-202ENST00000342310 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
LMX1A-202ENST00000342310 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 NOP10Q9NPE3 64 aaKnown RBP9.25□□□□□ -0.93
LMX1A-202ENST00000342310 YAE1D1Q9NRH1 226 aa9.25□□□□□ -0.93
LMX1A-202ENST00000342310 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
LMX1A-202ENST00000342310 RNASE1P07998 156 aaKnown RBP9.24□□□□□ -0.93
LMX1A-202ENST00000342310 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
LMX1A-202ENST00000342310 RPL13AP40429 203 aaKnown RBP9.24□□□□□ -0.93
LMX1A-202ENST00000342310 NOTCH1P46531 2555 aa9.24□□□□□ -0.93
LMX1A-202ENST00000342310 TRAV8-4A0A0B4J246 113 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 LINC01619G3V211 115 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 TAL2Q16559 108 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 UNC79Q9P2D8 2635 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 RHODO00212 210 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 COX6CP09669 75 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 LINC00315P59091 139 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 IGLV4-3A0A075B6K6 122 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 ZNF22P17026 224 aaPredicted RBP9.23□□□□□ -0.93
LMX1A-202ENST00000342310 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
LMX1A-202ENST00000342310 ZNF415Q09FC8 603 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 TEN1Q86WV5 123 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 LINC00467Q9BRT7 94 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 PEMTQ9UBM1 199 aa9.23□□□□□ -0.93
LMX1A-202ENST00000342310 M0R2P5 195 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 MAST4O15021 2626 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 HTN3P15516 51 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 PRIMA1Q86XR5 153 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms