RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 ATP5J2P56134 94 aa11.29□□□□□ -0.6
PERM1-201ENST00000341290 CEMP1Q6PRD7 247 aaPredicted RBP11.29□□□□□ -0.6
PERM1-201ENST00000341290 POM121L12Q8N7R1 296 aa11.29□□□□□ -0.6
PERM1-201ENST00000341290 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
PERM1-201ENST00000341290 MXRA5Q9NR99 2828 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 A0A0J9YXV3 536 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 M0QY20 66 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 TMEM141Q96I45 108 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 FBN2P35556 2912 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 A4D1N5 150 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 PROK1P58294 105 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 DEFB113Q30KQ7 82 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 NTN5Q8WTR8 489 aaPredicted RBP11.28□□□□□ -0.6
PERM1-201ENST00000341290 AMELXQ99217 191 aa11.28□□□□□ -0.6
PERM1-201ENST00000341290 A0A096LNT2 108 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 IGHV4-59P01825 116 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 SYNJ2BPP57105 145 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 LYRM7Q5U5X0 104 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 TIMM17AQ99595 171 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 JMJD1CQ15652 2540 aa11.27□□□□□ -0.6
PERM1-201ENST00000341290 PAPPA-AS1Q5QFB9 102 aa11.27□□□□□ -0.61
PERM1-201ENST00000341290 HELZ2Q9BYK8 2649 aaKnown RBP11.27□□□□□ -0.61
PERM1-201ENST00000341290 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 M0QXV9 152 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 EIF4EBP3O60516 100 aaPredicted RBP11.26□□□□□ -0.61
PERM1-201ENST00000341290 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 SPXQ9BT56 116 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 Q9UF83 564 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 LGALS9O00182 355 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
PERM1-201ENST00000341290 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 TEX49A0A1B0GTD5 131 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 H3BUA1 57 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 NPC2P61916 151 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 NIPBLQ6KC79 2804 aaeCLIP11.25□□□□□ -0.61
PERM1-201ENST00000341290 GCN1Q92616 2671 aaKnown RBP11.25□□□□□ -0.61
PERM1-201ENST00000341290 A0A0J9YX75 114 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 MSMBP08118 114 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 SNRPD3P62318 126 aaKnown RBP11.25□□□□□ -0.61
PERM1-201ENST00000341290 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
PERM1-201ENST00000341290 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
PERM1-201ENST00000341290 Q1RN00 199 aa11.24□□□□□ -0.61
PERM1-201ENST00000341290 A8MZ25 164 aa11.24□□□□□ -0.61
PERM1-201ENST00000341290 ELANEP08246 267 aa11.24□□□□□ -0.61
PERM1-201ENST00000341290 ZNF22P17026 224 aaPredicted RBP11.23□□□□□ -0.61
PERM1-201ENST00000341290 SBSPONQ8IVN8 264 aa11.23□□□□□ -0.61
PERM1-201ENST00000341290 NF1P21359 2839 aa11.23□□□□□ -0.61
PERM1-201ENST00000341290 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
PERM1-201ENST00000341290 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
PERM1-201ENST00000341290 PRSS2P07478 247 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 CFHR3Q02985 330 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 PSMB8P28062 276 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 DEFB112Q30KQ8 113 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 C20orf203Q8NBC4 194 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 CR1P17927 2039 aa11.22□□□□□ -0.61
PERM1-201ENST00000341290 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.61
PERM1-201ENST00000341290 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
PERM1-201ENST00000341290 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
PERM1-201ENST00000341290 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
PERM1-201ENST00000341290 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
PERM1-201ENST00000341290 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
PERM1-201ENST00000341290 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
PERM1-201ENST00000341290 ANKRD17O75179 2603 aaKnown RBP11.21□□□□□ -0.61
PERM1-201ENST00000341290 I3L3M4 83 aa11.21□□□□□ -0.62
PERM1-201ENST00000341290 K7EMT4 169 aa11.21□□□□□ -0.62
PERM1-201ENST00000341290 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.62
PERM1-201ENST00000341290 CD28P10747 220 aa11.2□□□□□ -0.62
PERM1-201ENST00000341290 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
PERM1-201ENST00000341290 LEPROTO15243 131 aa11.2□□□□□ -0.62
PERM1-201ENST00000341290 Q6ZSV7 163 aa11.2□□□□□ -0.62
PERM1-201ENST00000341290 K7EQG2 157 aa11.19□□□□□ -0.62
PERM1-201ENST00000341290 NSUN5P1Q3KNT7 163 aa11.19□□□□□ -0.62
PERM1-201ENST00000341290 PDZD2O15018 2839 aa11.19□□□□□ -0.62
PERM1-201ENST00000341290 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
PERM1-201ENST00000341290 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
PERM1-201ENST00000341290 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
PERM1-201ENST00000341290 TMEM263Q8WUH6 116 aaKnown RBP11.18□□□□□ -0.62
PERM1-201ENST00000341290 IGHV3-30-3P0DP02 117 aa11.18□□□□□ -0.62
PERM1-201ENST00000341290 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
PERM1-201ENST00000341290 LOC107984640A0A0U1RRK4 108 aa11.17□□□□□ -0.62
PERM1-201ENST00000341290 RHOHQ15669 191 aa11.17□□□□□ -0.62
PERM1-201ENST00000341290 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
PERM1-201ENST00000341290 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
PERM1-201ENST00000341290 MRPL23Q16540 153 aaKnown RBP11.17□□□□□ -0.62
PERM1-201ENST00000341290 Q6ZSN1 163 aa11.17□□□□□ -0.62
PERM1-201ENST00000341290 TEX15Q9BXT5 2789 aa11.16□□□□□ -0.62
PERM1-201ENST00000341290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
PERM1-201ENST00000341290 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
PERM1-201ENST00000341290 LINC00694P0DN24 101 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms