RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TMEM101Q96IK0 257 aa11.27□□□□□ -0.61
BRAT1-201ENST00000340611 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.61
BRAT1-201ENST00000340611 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 IGLV2-18A0A075B6J9 118 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 RNASE1P07998 156 aaKnown RBP11.26□□□□□ -0.61
BRAT1-201ENST00000340611 ELANEP08246 267 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 CD28P10747 220 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 PLNP26678 52 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 Q1RN00 199 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 METTL26Q96S19 204 aa11.26□□□□□ -0.61
BRAT1-201ENST00000340611 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 NDUFA7O95182 113 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 SLURP1P55000 103 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 PMVKQ15126 192 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 J3KT08 172 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 SPRY2O43597 315 aa11.25□□□□□ -0.61
BRAT1-201ENST00000340611 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
BRAT1-201ENST00000340611 H7C1H1 209 aa11.24□□□□□ -0.61
BRAT1-201ENST00000340611 DEFB1P60022 68 aa11.24□□□□□ -0.61
BRAT1-201ENST00000340611 LAGE3Q14657 143 aa11.24□□□□□ -0.61
BRAT1-201ENST00000340611 F8VRH5 84 aa11.24□□□□□ -0.61
BRAT1-201ENST00000340611 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
BRAT1-201ENST00000340611 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
BRAT1-201ENST00000340611 F5H768 121 aa11.23□□□□□ -0.61
BRAT1-201ENST00000340611 NDUFA4O00483 81 aa11.23□□□□□ -0.61
BRAT1-201ENST00000340611 HOXD3P31249 432 aaPredicted RBP11.23□□□□□ -0.61
BRAT1-201ENST00000340611 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
BRAT1-201ENST00000340611 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
BRAT1-201ENST00000340611 LINC01559Q495D7 138 aa11.22□□□□□ -0.61
BRAT1-201ENST00000340611 NRACQ8N912 160 aa11.22□□□□□ -0.61
BRAT1-201ENST00000340611 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
BRAT1-201ENST00000340611 CITED2Q99967 270 aaPredicted RBP11.22□□□□□ -0.61
BRAT1-201ENST00000340611 H3BMM0 161 aa11.22□□□□□ -0.61
BRAT1-201ENST00000340611 ZNF22P17026 224 aaPredicted RBP11.22□□□□□ -0.61
BRAT1-201ENST00000340611 UBE2WQ96B02 151 aa11.22□□□□□ -0.61
BRAT1-201ENST00000340611 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
BRAT1-201ENST00000340611 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.61
BRAT1-201ENST00000340611 HERVK_113P61574 105 aa11.21□□□□□ -0.61
BRAT1-201ENST00000340611 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
BRAT1-201ENST00000340611 OR13C6PQ8NH95 151 aa11.21□□□□□ -0.62
BRAT1-201ENST00000340611 AGPAT4-IT1Q9H0P7 198 aa11.21□□□□□ -0.62
BRAT1-201ENST00000340611 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
BRAT1-201ENST00000340611 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
BRAT1-201ENST00000340611 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.2□□□□□ -0.62
BRAT1-201ENST00000340611 U3KQE9 123 aa11.2□□□□□ -0.62
BRAT1-201ENST00000340611 LGALS9O00182 355 aa11.2□□□□□ -0.62
BRAT1-201ENST00000340611 TRRAPQ9Y4A5 3859 aa11.2□□□□□ -0.62
BRAT1-201ENST00000340611 LINC01619G3V211 115 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 LINC01620Q4KN68 170 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 DAZ1Q9NQZ3 744 aaKnown RBP11.19□□□□□ -0.62
BRAT1-201ENST00000340611 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 RNF152Q8N8N0 203 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 IGHV7-4-1A0A0J9YVY3 117 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
BRAT1-201ENST00000340611 STAB1Q9NY15 2570 aa11.18□□□□□ -0.62
BRAT1-201ENST00000340611 WIPF1O43516 503 aa11.18□□□□□ -0.62
BRAT1-201ENST00000340611 NSUN5P1Q3KNT7 163 aa11.18□□□□□ -0.62
BRAT1-201ENST00000340611 A0A0J9YY99 117 aa11.17□□□□□ -0.62
BRAT1-201ENST00000340611 KIR2DL5BQ8NHK3 375 aa11.17□□□□□ -0.62
BRAT1-201ENST00000340611 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
BRAT1-201ENST00000340611 IGHV3-30P01768 117 aa11.16□□□□□ -0.62
BRAT1-201ENST00000340611 IGHV3-30-5P0DP03 117 aa11.16□□□□□ -0.62
BRAT1-201ENST00000340611 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
BRAT1-201ENST00000340611 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
BRAT1-201ENST00000340611 SMIM2Q9BVW6 85 aa11.16□□□□□ -0.62
BRAT1-201ENST00000340611 M0R2P5 195 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 M0R381 172 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 RPL39LQ96EH5 51 aaKnown RBP11.15□□□□□ -0.62
BRAT1-201ENST00000340611 F6UB75 175 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 ATXN8Q156A1 80 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 C16orf92Q96LL3 132 aa11.15□□□□□ -0.62
BRAT1-201ENST00000340611 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.63
BRAT1-201ENST00000340611 PROK1P58294 105 aa11.15□□□□□ -0.63
BRAT1-201ENST00000340611 hADV29S1A0JD25 119 aa11.14□□□□□ -0.63
BRAT1-201ENST00000340611 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
BRAT1-201ENST00000340611 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
BRAT1-201ENST00000340611 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
BRAT1-201ENST00000340611 PRR9Q5T870 116 aa11.14□□□□□ -0.63
BRAT1-201ENST00000340611 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.13□□□□□ -0.63
BRAT1-201ENST00000340611 UQCRQO14949 82 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 CYSTM1Q9H1C7 97 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 TRAV12-1A0A0B4J245 112 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 TRBV10-2A0A0K0K1G8 114 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 CCL24O00175 119 aa11.12□□□□□ -0.63
BRAT1-201ENST00000340611 MGPP08493 103 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms