RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 C5orf38Q86SI9 138 aa5.71□□□□□ -1.49
HIPK1-201ENST00000340480 USP9YO00507 2555 aaPredicted RBP5.71□□□□□ -1.5
HIPK1-201ENST00000340480 CDPF1Q6NVV7 123 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 DEFB114Q30KQ6 69 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 PRO0255Q9UI72 69 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 SMIM9A6NGZ8 99 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 J3QQQ9 107 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 K7ERS5 55 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 AVPP01185 164 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 ADAMTSL5Q6ZMM2 481 aa5.71□□□□□ -1.5
HIPK1-201ENST00000340480 RAI1Q7Z5J4 1906 aaPredicted RBP5.7□□□□□ -1.5
HIPK1-201ENST00000340480 IFITM1P13164 125 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 GATA1P15976 413 aaPredicted RBP5.7□□□□□ -1.5
HIPK1-201ENST00000340480 C20orf173Q96LM9 149 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 HIST2H2BCQ6DN03 193 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 USP9XQ93008 2570 aaPredicted RBP5.7□□□□□ -1.5
HIPK1-201ENST00000340480 DOPEY2Q9Y3R5 2298 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 IGLV10-54A0A075B6I4 117 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 RS1O15537 224 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 NREPQ16612 68 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 Q9H8V8 135 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 NDUFA7O95182 113 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 FSHBP01225 129 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 COX7B2Q8TF08 81 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 ZNF462Q96JM2 2506 aa5.7□□□□□ -1.5
HIPK1-201ENST00000340480 SPAG11BQ08648 103 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 DCANP1Q8TF63 244 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 TMEM263Q8WUH6 116 aaKnown RBP5.69□□□□□ -1.5
HIPK1-201ENST00000340480 LRCOL1A6NCL2 159 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
HIPK1-201ENST00000340480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
HIPK1-201ENST00000340480 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
HIPK1-201ENST00000340480 NPSP0C0P6 89 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 DEFB125Q8N687 156 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 RPL39LQ96EH5 51 aaKnown RBP5.69□□□□□ -1.5
HIPK1-201ENST00000340480 PRO1854Q9UHT4 67 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 LYRM9A8MSI8 78 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 FGF6P10767 208 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 DIRC1Q969H9 104 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 LINC00173Q6ZV60 143 aa5.69□□□□□ -1.5
HIPK1-201ENST00000340480 TINCRA0A1B0GVN0 87 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 C9orf118A6NHY6 69 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 PLA2G2AP14555 144 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 C20orf203Q8NBC4 194 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 RNF185Q96GF1 192 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 UBE2D4Q9Y2X8 147 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 Q6ZVH6 145 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 H0Y9J4 135 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 BAALCQ8WXS3 180 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
HIPK1-201ENST00000340480 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 PCP4P48539 62 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 Q8N2B8 174 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 ESM1Q9NQ30 184 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 E9PLD3 99 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 WFDC9Q8NEX5 89 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 C9orf85Q96MD7 179 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 ARHGAP32A7KAX9 2087 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 TRBV7-3A0A075B6L6 115 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 INAFM1C9JVW0 142 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 C14orf132Q9NPU4 83 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 CRYGDP07320 174 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 A0A087WZ39 114 aa5.67□□□□□ -1.5
HIPK1-201ENST00000340480 IGKV2-24A0A0C4DH68 120 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 TRBV27A0A0K0K1C4 114 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 LINC00310P59036 64 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 CEND1Q8N111 149 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 SND1-IT1Q9HBX3 110 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 RANBP2P49792 3224 aaKnown RBP5.66□□□□□ -1.5
HIPK1-201ENST00000340480 ZNF292O60281 2723 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 MDFICQ9P1T7 246 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 MAJINQ3KP22 176 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 RNASE13Q5GAN3 156 aaKnown RBP5.66□□□□□ -1.5
HIPK1-201ENST00000340480 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 C16orf95Q9H693 158 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 CCL25O15444 150 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 LY6G6CO95867 125 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 ACYP1P07311 99 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 PDE6GP18545 87 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 FAM110AQ9BQ89 295 aa5.66□□□□□ -1.5
HIPK1-201ENST00000340480 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
HIPK1-201ENST00000340480 BAALC-AS2P0C853 105 aa5.65□□□□□ -1.5
HIPK1-201ENST00000340480 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.5
HIPK1-201ENST00000340480 LINC01006Q8NI28 216 aa5.65□□□□□ -1.5
HIPK1-201ENST00000340480 DSCAML1Q8TD84 2053 aa5.65□□□□□ -1.5
HIPK1-201ENST00000340480 DEFB1P60022 68 aa5.65□□□□□ -1.5
HIPK1-201ENST00000340480 P0DMU3 169 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms