RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
SDCBP2-201ENST00000339987 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
SDCBP2-201ENST00000339987 LOC389332A0A1B0GUA5 103 aa12.32□□□□□ -0.44
SDCBP2-201ENST00000339987 CCL18P55774 89 aa12.32□□□□□ -0.44
SDCBP2-201ENST00000339987 Q8N8P6 123 aa12.32□□□□□ -0.44
SDCBP2-201ENST00000339987 C18orf32Q8TCD1 76 aa12.32□□□□□ -0.44
SDCBP2-201ENST00000339987 KIR2DL4Q99706 377 aa12.32□□□□□ -0.44
SDCBP2-201ENST00000339987 TCAPO15273 167 aa12.31□□□□□ -0.44
SDCBP2-201ENST00000339987 TSHBP01222 138 aa12.31□□□□□ -0.44
SDCBP2-201ENST00000339987 LELP1Q5T871 98 aa12.31□□□□□ -0.44
SDCBP2-201ENST00000339987 NTM-AS1Q6ZSK4 140 aa12.31□□□□□ -0.44
SDCBP2-201ENST00000339987 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
SDCBP2-201ENST00000339987 MRPS16Q9Y3D3 137 aaKnown RBP12.3□□□□□ -0.44
SDCBP2-201ENST00000339987 IFI27P40305 119 aaPredicted RBP12.29□□□□□ -0.44
SDCBP2-201ENST00000339987 IQCJQ1A5X6 159 aa12.29□□□□□ -0.44
SDCBP2-201ENST00000339987 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
SDCBP2-201ENST00000339987 IGHV1-24A0A0C4DH33 117 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 K7EMI3 77 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 AKR1D1P51857 326 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 TRBV25-1A0A075B6N4 114 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 LINC01546A6NGU7 62 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 FCER1GP30273 86 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 AMTP48728 403 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 HIST3H2BBQ8N257 126 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
SDCBP2-201ENST00000339987 TRAV8-6A0A0B4J262 113 aa12.27□□□□□ -0.45
SDCBP2-201ENST00000339987 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
SDCBP2-201ENST00000339987 TMEM18Q96B42 140 aa12.27□□□□□ -0.45
SDCBP2-201ENST00000339987 ESDP10768 282 aa12.26□□□□□ -0.45
SDCBP2-201ENST00000339987 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
SDCBP2-201ENST00000339987 FA2HQ7L5A8 372 aa12.26□□□□□ -0.45
SDCBP2-201ENST00000339987 UBE2DNLQ8IWF7 75 aa12.26□□□□□ -0.45
SDCBP2-201ENST00000339987 TMEM243Q9BU79 118 aa12.26□□□□□ -0.45
SDCBP2-201ENST00000339987 CHCHD7Q9BUK0 85 aa12.26□□□□□ -0.45
SDCBP2-201ENST00000339987 SERF1AO75920 110 aa12.25□□□□□ -0.45
SDCBP2-201ENST00000339987 LGALS9CQ6DKI2 356 aa12.25□□□□□ -0.45
SDCBP2-201ENST00000339987 PLECQ15149 4684 aaKnown RBP12.25□□□□□ -0.45
SDCBP2-201ENST00000339987 LAGE3Q14657 143 aa12.24□□□□□ -0.45
SDCBP2-201ENST00000339987 ORMDL2Q53FV1 153 aa12.24□□□□□ -0.45
SDCBP2-201ENST00000339987 NIT1Q86X76 327 aa12.24□□□□□ -0.45
SDCBP2-201ENST00000339987 URB1-AS1Q96HZ7 61 aa12.24□□□□□ -0.45
SDCBP2-201ENST00000339987 H7C423 109 aa12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 LINC00614P0C842 121 aa12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 FABP4P15090 132 aa12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 PKIAP61925 76 aa12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 CHCHD1Q96BP2 118 aaKnown RBP12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 AP5S1Q9NUS5 200 aa12.23□□□□□ -0.45
SDCBP2-201ENST00000339987 HSBP1O75506 76 aa12.22□□□□□ -0.45
SDCBP2-201ENST00000339987 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
SDCBP2-201ENST00000339987 TENM2Q9NT68 2774 aa12.22□□□□□ -0.45
SDCBP2-201ENST00000339987 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.45
SDCBP2-201ENST00000339987 PACRGQ96M98 296 aaPredicted RBP12.21□□□□□ -0.45
SDCBP2-201ENST00000339987 G0S2P27469 103 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 LINC00476Q8WZB0 136 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 IGKV2-29A2NJV5 120 aaPredicted RBP12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 UBE2L6O14933 153 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 SIVA1O15304 175 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 GAGE6Q13070 117 aa12.2□□□□□ -0.46
SDCBP2-201ENST00000339987 LINC00310P59036 64 aa12.19□□□□□ -0.46
SDCBP2-201ENST00000339987 LINC01556Q5JQF7 62 aa12.19□□□□□ -0.46
SDCBP2-201ENST00000339987 Q9H8V8 135 aa12.19□□□□□ -0.46
SDCBP2-201ENST00000339987 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
SDCBP2-201ENST00000339987 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
SDCBP2-201ENST00000339987 CYSLTR1Q9Y271 337 aa12.18□□□□□ -0.46
SDCBP2-201ENST00000339987 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 LINC01549A6NIU2 74 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 IFITM10A6NMD0 228 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 FGF6P10767 208 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 C2orf66Q6UXQ4 117 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 OR10D4PQ8NGN7 298 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
SDCBP2-201ENST00000339987 A0A087WX48 190 aa12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 NUPR1O60356 82 aa12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 BTF3P20290 206 aaKnown RBP12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 RPL39P62891 51 aaKnown RBP12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 AMMECR1LQ6DCA0 310 aa12.16□□□□□ -0.46
SDCBP2-201ENST00000339987 ALMS1Q8TCU4 4167 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 LY6G6CO95867 125 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 SMIM6P0DI80 62 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 RBX1P62877 108 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 TOMM6Q96B49 74 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
SDCBP2-201ENST00000339987 A0A096LNJ9 63 aa12.14□□□□□ -0.47
SDCBP2-201ENST00000339987 K7EP13 123 aa12.14□□□□□ -0.47
SDCBP2-201ENST00000339987 Q8N3U1 123 aa12.14□□□□□ -0.47
SDCBP2-201ENST00000339987 IGHV3-30P01768 117 aa12.13□□□□□ -0.47
SDCBP2-201ENST00000339987 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
SDCBP2-201ENST00000339987 HBDP02042 147 aa12.13□□□□□ -0.47
SDCBP2-201ENST00000339987 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms