RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 TMEM223A0PJW6 202 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 NDUFA7O95182 113 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 MDKP21741 143 aaPredicted RBP2.54□□□□□ -2
CSMD3-202ENST00000339701 UBE2D3P61077 147 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 CASC2Q6XLA1 102 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 LEAP2Q969E1 77 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 IGHV3OR16-13A0A075B7E8 117 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 IGHV3-74A0A0B4J1X5 117 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 COX7CP15954 63 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 LINC00322Q6ZN03 302 aaPredicted RBP2.54□□□□□ -2
CSMD3-202ENST00000339701 GGNQ86UU5 652 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 DEPPQ9NTK1 212 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 C1orf195Q5TG92 126 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 TRAV12-3A0A0B4J271 114 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 XCL1P47992 114 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.54□□□□□ -2
CSMD3-202ENST00000339701 NPBQ8NG41 125 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 TPSG1Q9NRR2 321 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 GYPEP15421 78 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 MRPL35Q9NZE8 188 aaKnown RBP2.54□□□□□ -2
CSMD3-202ENST00000339701 MAST4O15021 2626 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 IGLC1P0CG04 106 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 GNG5P63218 68 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 CSDC2Q9Y534 153 aaKnown RBP2.54□□□□□ -2
CSMD3-202ENST00000339701 IGHV4OR15-8A0A075B7B6 117 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 A0A087WW49 117 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 IGHV7-4-1A0A0J9YVY3 117 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 DYNAPQ8N1N2 210 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 CD177Q8N6Q3 437 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 SVIPQ8NHG7 77 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 TOMM6Q96B49 74 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 IGLV1-44P01699 117 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 RPL18AQ02543 176 aaKnown RBP2.54□□□□□ -2
CSMD3-202ENST00000339701 DEFB135Q30KP9 77 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 KRTAP27-1Q3LI81 207 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 PRO0255Q9UI72 69 aa2.54□□□□□ -2
CSMD3-202ENST00000339701 TFF3Q07654 80 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 ASPHD1Q5U4P2 390 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 WFDC9Q8NEX5 89 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 TRAV7A0A075B6U4 112 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 M0R2N4 97 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 SLURP1P55000 103 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 C5orf38Q86SI9 138 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 TRBV6-5A0A0K0K1A5 114 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 MIFP14174 115 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 IGKV1-9A0A0C4DH69 117 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 IGKV1-5P01602 117 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 CRYGCP07315 174 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 IGLV3-1P01715 115 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 RPL39P5Q59GN2 51 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 C14orf178Q8N769 122 aaPredicted RBP2.53□□□□□ -2
CSMD3-202ENST00000339701 KLK9Q9UKQ9 250 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 IGHV3-53P01767 116 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 REG3GQ6UW15 175 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 COX7B2Q8TF08 81 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 IGLV5-52A0A0A0MRZ9 124 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 IGF1P05019 195 aa2.53□□□□□ -2
CSMD3-202ENST00000339701 C16orf90A8MZG2 172 aa2.53□□□□□ -2.01
CSMD3-202ENST00000339701 DEFB114Q30KQ6 69 aa2.53□□□□□ -2.01
CSMD3-202ENST00000339701 PLA2G2EQ9NZK7 142 aa2.53□□□□□ -2.01
CSMD3-202ENST00000339701 OVOL3O00110 214 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 FHL1Q13642 323 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 DMBT1Q9UGM3 2413 aaPredicted RBP2.52□□□□□ -2.01
CSMD3-202ENST00000339701 EDN2P20800 178 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 CELA1Q9UNI1 258 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 GOLGB1Q14789 3259 aaKnown RBP2.52□□□□□ -2.01
CSMD3-202ENST00000339701 TRBV6-4A0A1B0GX49 114 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 K7EQD1 137 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 NDUFS7O75251 213 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 CD164L2Q6UWJ8 174 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 NTN5Q8WTR8 489 aaPredicted RBP2.52□□□□□ -2.01
CSMD3-202ENST00000339701 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 GFI1Q99684 422 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 PINLYPA6NC86 204 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 PRSS29PA6NIE9 313 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 IGLV2-23P01705 113 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 Q6YL49 198 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 CRYGBP07316 175 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 CFHR3Q02985 330 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 ZNF491Q8N8L2 437 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 RETNQ9HD89 108 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 Q9H8V8 135 aa2.52□□□□□ -2.01
CSMD3-202ENST00000339701 BAHCC1Q9P281 2608 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 UTRNP46939 3433 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 A0A1B0GXF2 115 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 CRYGDP07320 174 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 ADCYAP1P18509 176 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 COX7BP24311 80 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 IGLV2-18A0A075B6J9 118 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 TRBV7-6A0A0J9YX20 115 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 ATP6V0E1O15342 81 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 ERC2-IT1O76042 136 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 HHLA3Q9XRX5 114 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 S4R3C0 116 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 TEX22C9J3V5 150 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1-16P04430 117 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV4-38-2P0DP08 117 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms