RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
CDK5RAP1-201ENST00000339269 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
CDK5RAP1-201ENST00000339269 LINC01006Q8NI28 216 aa9.42□□□□□ -0.9
CDK5RAP1-201ENST00000339269 ZNF418Q8TF45 676 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP1-201ENST00000339269 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 RNASE1P07998 156 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 RAB37Q96AX2 223 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 C16orf95Q9H693 158 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
CDK5RAP1-201ENST00000339269 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.9
CDK5RAP1-201ENST00000339269 A4D1N5 150 aa9.4□□□□□ -0.9
CDK5RAP1-201ENST00000339269 CFAP126Q5VTH2 177 aa9.4□□□□□ -0.9
CDK5RAP1-201ENST00000339269 PLEKHB2Q96CS7 222 aa9.4□□□□□ -0.9
CDK5RAP1-201ENST00000339269 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
CDK5RAP1-201ENST00000339269 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 I3L3M4 83 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 AZU1P20160 251 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 CRYBA4P53673 196 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 ZNF415Q09FC8 603 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 TAL2Q16559 108 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 BEAN1Q3B7T3 259 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 IL17DQ8TAD2 202 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 AMELXQ99217 191 aa9.4□□□□□ -0.91
CDK5RAP1-201ENST00000339269 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
CDK5RAP1-201ENST00000339269 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
CDK5RAP1-201ENST00000339269 FBN1P35555 2871 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 A8MWV9 139 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 K7EP34 96 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 INSP01308 110 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 LINC01587Q99440 93 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 A0A1B0GWB2 263 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 HILS1P60008 231 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
CDK5RAP1-201ENST00000339269 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP1-201ENST00000339269 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
CDK5RAP1-201ENST00000339269 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 RS1O15537 224 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 C12orf74Q32Q52 190 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 PAPPA-AS1Q5QFB9 102 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
CDK5RAP1-201ENST00000339269 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
CDK5RAP1-201ENST00000339269 IGHV3-53P01767 116 aa9.35□□□□□ -0.91
CDK5RAP1-201ENST00000339269 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
CDK5RAP1-201ENST00000339269 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
CDK5RAP1-201ENST00000339269 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
CDK5RAP1-201ENST00000339269 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 PYGO1Q9Y3Y4 419 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 A0A0J9YY99 117 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 TMEM223A0PJW6 202 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 IGLL5B9A064 214 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 CEMP1Q6PRD7 247 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 STHQ8IWL8 128 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
CDK5RAP1-201ENST00000339269 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
CDK5RAP1-201ENST00000339269 KRTAP10-3P60369 221 aa9.33□□□□□ -0.92
CDK5RAP1-201ENST00000339269 KRTAP24-1Q3LI83 254 aa9.33□□□□□ -0.92
CDK5RAP1-201ENST00000339269 TMEM170BQ5T4T1 132 aa9.33□□□□□ -0.92
CDK5RAP1-201ENST00000339269 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
CDK5RAP1-201ENST00000339269 RHODO00212 210 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGLV1-51P01701 117 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 HERVK_113P61574 105 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 CITED1Q99966 193 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 HERV-K104P63124 156 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 KRTAP21-3Q3LHN1 58 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 GTF2H5Q6ZYL4 71 aa9.32□□□□□ -0.92
CDK5RAP1-201ENST00000339269 PLAC8L1A1L4L8 177 aa9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 J3QQQ9 107 aa9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 NDUFA7O95182 113 aa9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 UBE2D1P51668 147 aa9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 MDFIQ99750 246 aa9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 UBE2D4Q9Y2X8 147 aa9.31□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGHV3OR16-12A0A075B7B8 117 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 FABP2P12104 132 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGHV3-38A0A0C4DH36 116 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGKV2-29A2NJV5 120 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 LEPROTO15243 131 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 SAP30O75446 220 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 TSPAN13O95857 204 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 MRPS36P82909 103 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 RNASE13Q5GAN3 156 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 Q6ZTI0 123 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 DNAJC30Q96LL9 226 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 VCX2Q9H322 139 aa9.3□□□□□ -0.92
CDK5RAP1-201ENST00000339269 STAB1Q9NY15 2570 aa9.29□□□□□ -0.92
CDK5RAP1-201ENST00000339269 RRN3P1Q2M238 152 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms