RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GAGE7O76087 117 aa11.59□□□□□ -0.55
HPS1-202ENST00000338546 GAGE12FP0CL80 117 aa11.59□□□□□ -0.55
HPS1-202ENST00000338546 GAGE12GP0CL81 117 aa11.59□□□□□ -0.55
HPS1-202ENST00000338546 GAGE12IP0CL82 117 aa11.59□□□□□ -0.55
HPS1-202ENST00000338546 COTL1Q14019 142 aa11.59□□□□□ -0.55
HPS1-202ENST00000338546 DAZ4Q86SG3 579 aaKnown RBP11.59□□□□□ -0.55
HPS1-202ENST00000338546 STPG4Q8N801 248 aa11.59□□□□□ -0.55
HPS1-202ENST00000338546 DAZ3Q9NR90 486 aaKnown RBP11.59□□□□□ -0.55
HPS1-202ENST00000338546 CTAG1AP78358 180 aa11.58□□□□□ -0.55
HPS1-202ENST00000338546 EGFEM1PQ0D2K5 195 aa11.58□□□□□ -0.55
HPS1-202ENST00000338546 LYRM9A8MSI8 78 aa11.58□□□□□ -0.56
HPS1-202ENST00000338546 A8MZ25 164 aa11.58□□□□□ -0.56
HPS1-202ENST00000338546 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
HPS1-202ENST00000338546 SLC25A29Q8N8R3 303 aa11.58□□□□□ -0.56
HPS1-202ENST00000338546 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
HPS1-202ENST00000338546 CST9LQ9H4G1 147 aa11.58□□□□□ -0.56
HPS1-202ENST00000338546 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
HPS1-202ENST00000338546 ZNRF2Q8NHG8 242 aa11.57□□□□□ -0.56
HPS1-202ENST00000338546 SNHG12Q9BXW3 62 aa11.57□□□□□ -0.56
HPS1-202ENST00000338546 SPANXA1Q9NS26 97 aa11.57□□□□□ -0.56
HPS1-202ENST00000338546 Q9UF83 564 aa11.57□□□□□ -0.56
HPS1-202ENST00000338546 SIVA1O15304 175 aa11.56□□□□□ -0.56
HPS1-202ENST00000338546 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
HPS1-202ENST00000338546 UBE2D3P61077 147 aa11.56□□□□□ -0.56
HPS1-202ENST00000338546 UBE2D2P62837 147 aa11.56□□□□□ -0.56
HPS1-202ENST00000338546 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
HPS1-202ENST00000338546 TRGV4A0A0C4DH28 118 aa11.55□□□□□ -0.56
HPS1-202ENST00000338546 FGF6P10767 208 aa11.55□□□□□ -0.56
HPS1-202ENST00000338546 MIFP14174 115 aa11.55□□□□□ -0.56
HPS1-202ENST00000338546 SMAGPQ0VAQ4 97 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 FHL2Q14192 279 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 RNF183Q96D59 192 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 PRADC1Q9BSG0 188 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 TIMM21Q9BVV7 248 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 OR11H2Q8NH07 326 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 VCX2Q9H322 139 aa11.54□□□□□ -0.56
HPS1-202ENST00000338546 EMP1P54849 157 aa11.53□□□□□ -0.56
HPS1-202ENST00000338546 AMELXQ99217 191 aa11.53□□□□□ -0.56
HPS1-202ENST00000338546 IGLV4-69A0A075B6H9 119 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 EREGO14944 169 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 NMUP48645 174 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 OXLD1Q5BKU9 147 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 NFE4Q86UQ8 179 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.57
HPS1-202ENST00000338546 UBE2D4Q9Y2X8 147 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.57
HPS1-202ENST00000338546 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
HPS1-202ENST00000338546 TMEM97Q5BJF2 176 aa11.51□□□□□ -0.57
HPS1-202ENST00000338546 IGHV3-38A0A0C4DH36 116 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 GAGE12JA6NER3 117 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 H7C423 109 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 GAGE1Q13065 139 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 GAGE4Q13068 117 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 GAGE5Q13069 117 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 GAGE13Q4V321 117 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 CSDC2Q9Y534 153 aaKnown RBP11.5□□□□□ -0.57
HPS1-202ENST00000338546 C11orf86A6NJI1 115 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 E9PLD3 99 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 DEFB130BP0DP73 79 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 DEFB130AP0DP74 79 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 HERVK_113P61574 105 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 HIGD1BQ9P298 99 aa11.5□□□□□ -0.57
HPS1-202ENST00000338546 IGKV2D-26A0A0A0MRZ7 120 aa11.49□□□□□ -0.57
HPS1-202ENST00000338546 IGHV4-28A0A0C4DH34 117 aa11.49□□□□□ -0.57
HPS1-202ENST00000338546 FAM222AQ5U5X8 452 aa11.49□□□□□ -0.57
HPS1-202ENST00000338546 PCP2Q8IVA1 136 aa11.49□□□□□ -0.57
HPS1-202ENST00000338546 Q8NAQ8 132 aa11.49□□□□□ -0.57
HPS1-202ENST00000338546 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
HPS1-202ENST00000338546 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
HPS1-202ENST00000338546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
HPS1-202ENST00000338546 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
HPS1-202ENST00000338546 COL5A1-AS1Q5SY13 56 aa11.47□□□□□ -0.57
HPS1-202ENST00000338546 SBSPONQ8IVN8 264 aa11.47□□□□□ -0.57
HPS1-202ENST00000338546 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
HPS1-202ENST00000338546 PRO0255Q9UI72 69 aa11.47□□□□□ -0.57
HPS1-202ENST00000338546 NTM-AS1Q6ZSK4 140 aa11.46□□□□□ -0.57
HPS1-202ENST00000338546 SPART-AS1P0CW21 52 aa11.45□□□□□ -0.58
HPS1-202ENST00000338546 DGAT2L7PQ6IED9 249 aa11.45□□□□□ -0.58
HPS1-202ENST00000338546 FBN1P35555 2871 aaKnown RBP11.45□□□□□ -0.58
HPS1-202ENST00000338546 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
HPS1-202ENST00000338546 TMEM243Q9BU79 118 aa11.45□□□□□ -0.58
HPS1-202ENST00000338546 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
HPS1-202ENST00000338546 HINT1P49773 126 aaPredicted RBP11.44□□□□□ -0.58
HPS1-202ENST00000338546 TCTAP57738 103 aa11.44□□□□□ -0.58
HPS1-202ENST00000338546 DAD1P61803 113 aa11.44□□□□□ -0.58
HPS1-202ENST00000338546 HSD52Q0P140 79 aa11.44□□□□□ -0.58
HPS1-202ENST00000338546 TP73-AS1Q9UF72 201 aa11.44□□□□□ -0.58
HPS1-202ENST00000338546 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 TINCRA0A1B0GVN0 87 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
HPS1-202ENST00000338546 BATFQ16520 125 aa11.43□□□□□ -0.58
HPS1-202ENST00000338546 MPV17L2Q567V2 206 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms