RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 TRAV13-1A0A0B4J241 112 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 BUB1B-PAK6H3BSN5 160 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 EDN2P20800 178 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 KLRB1Q12918 225 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 MIAQ16674 131 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 BEAN1Q3B7T3 259 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 COL27A1Q8IZC6 1860 aaPredicted RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 APCP25054 2843 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 ANKHD1Q8IWZ3 2542 aaKnown RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 LY6LH3BQJ8 138 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 BUB3O43684 328 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 DAZ2Q13117 558 aaKnown RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 NSUN5P1Q3KNT7 163 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 DAZ4Q86SG3 579 aaKnown RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 DEFB104AQ8WTQ1 72 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 MRPL53Q96EL3 112 aaKnown RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 LINC00477Q96M19 166 aa5.04□□□□□ -1.6
CAST-203ENST00000338252 DAZ1Q9NQZ3 744 aaKnown RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 DAZ3Q9NR90 486 aaKnown RBP5.04□□□□□ -1.6
CAST-203ENST00000338252 NIPBLQ6KC79 2804 aaeCLIP5.03□□□□□ -1.67e-8■■■□□ 15.3
CAST-203ENST00000338252 MALRD1Q5VYJ5 2156 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 J3QLI3 93 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 NDUFB3O43676 98 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 IGHV3-23P01764 117 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 IGHV3-30-3P0DP02 117 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 OPRPNQ99935 248 aaPredicted RBP5.03□□□□□ -1.6
CAST-203ENST00000338252 IGHV3OR16-8A0A075B7F1 116 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 TRBV27A0A0K0K1C4 114 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 ADARB2-AS1A8MUL3 147 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 VCYO14598 125 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 NXPH4O95158 308 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 PRSS2P07478 247 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 MED14OSP0DP75 135 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 DYNLRB1Q9NP97 96 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 PHLDA3Q9Y5J5 127 aa5.03□□□□□ -1.6
CAST-203ENST00000338252 POLEQ07864 2286 aa5.02□□□□□ -1.61
CAST-203ENST00000338252 EPM2AB3EWF7 344 aa5.02□□□□□ -1.61
CAST-203ENST00000338252 IGF1P05019 195 aa5.02□□□□□ -1.61
CAST-203ENST00000338252 PRB3Q04118 309 aaPredicted RBP5.02□□□□□ -1.61
CAST-203ENST00000338252 LENEPQ9Y5L5 61 aa5.02□□□□□ -1.61
CAST-203ENST00000338252 DNHD1Q96M86 4753 aa5.02□□□□□ -1.61
CAST-203ENST00000338252 A0A0J9YXV3 536 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 TMEM178BH3BS89 294 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 RNASE3P12724 160 aaKnown RBP5.01□□□□□ -1.61
CAST-203ENST00000338252 LINC00336Q6ZUF6 198 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 CLPSL1A2RUU4 121 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 COX7A2LO14548 114 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 NBR2O15453 112 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 FAM222AQ5U5X8 452 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 SUMO4Q6EEV6 95 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 ZFAND2AQ8N6M9 145 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 C10orf105Q8TEF2 133 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 CADP27708 2225 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 S100A4P26447 101 aaKnown RBP5.01□□□□□ -1.61
CAST-203ENST00000338252 FHL2Q14192 279 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 NPBQ8NG41 125 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 KAAG1Q9UBP8 84 aa5.01□□□□□ -1.61
CAST-203ENST00000338252 IGHV3-35A0A0C4DH35 117 aa5□□□□□ -1.61
CAST-203ENST00000338252 TRBV6-5A0A0K0K1A5 114 aa5□□□□□ -1.61
CAST-203ENST00000338252 PFN2P35080 140 aa5□□□□□ -1.61
CAST-203ENST00000338252 NPC2P61916 151 aa5□□□□□ -1.61
CAST-203ENST00000338252 VMO1Q7Z5L0 202 aa5□□□□□ -1.61
CAST-203ENST00000338252 LINC01561Q8N1V8 128 aa5□□□□□ -1.61
CAST-203ENST00000338252 ROS1P08922 2347 aa5□□□□□ -1.61
CAST-203ENST00000338252 TRAV21A0A0B4J279 112 aa5□□□□□ -1.61
CAST-203ENST00000338252 IGHV3-66A0A0C4DH42 116 aa5□□□□□ -1.61
CAST-203ENST00000338252 TINCRA0A1B0GVN0 87 aa5□□□□□ -1.61
CAST-203ENST00000338252 NDUFC2-KCTD14E9PQ53 114 aa5□□□□□ -1.61
CAST-203ENST00000338252 M0R1W7 72 aa5□□□□□ -1.61
CAST-203ENST00000338252 INAFM2P0DMQ5 153 aa5□□□□□ -1.61
CAST-203ENST00000338252 NDPQ00604 133 aa5□□□□□ -1.61
CAST-203ENST00000338252 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
CAST-203ENST00000338252 IGLV4-3A0A075B6K6 122 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 IGHV1-58A0A0C4DH39 117 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 TIMM17BO60830 172 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 FAM104AQ969W3 186 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 GNRH2O43555 120 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 BAALC-AS2P0C853 105 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 RNASE4P34096 147 aaKnown RBP4.99□□□□□ -1.61
CAST-203ENST00000338252 MRPS36P82909 103 aaKnown RBP4.99□□□□□ -1.61
CAST-203ENST00000338252 Q6JHZ5 121 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 C22orf34Q6ZV56 151 aa4.99□□□□□ -1.61
CAST-203ENST00000338252 ITLN2Q8WWU7 325 aaPredicted RBP4.99□□□□□ -1.61
CAST-203ENST00000338252 A0A087WVE0 104 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 TRAV12-3A0A0B4J271 114 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 PSMB8P28062 276 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 SYNJ2BPP57105 145 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 DEFB109BQ30KR1 87 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 SEM1Q6ZVN7 128 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 Q8N2B8 174 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 C20orf203Q8NBC4 194 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 NUP37Q8NFH4 326 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 C20orf173Q96LM9 149 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 C9orf85Q96MD7 179 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 APRG1Q8IVJ8 170 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 TMEM86BQ8N661 226 aa4.98□□□□□ -1.61
CAST-203ENST00000338252 CCL17Q92583 94 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms