RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 TNFRSF18Q9Y5U5 241 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 C1orf158Q8N1D5 194 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 A0A1W2PPM0 123 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 I3L3M4 83 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 INSP01308 110 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 C11orf72Q8NBR9 251 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 M0R2P5 195 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 SIVA1O15304 175 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 PPP1R17O96001 155 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 C20orf203Q8NBC4 194 aa6.41□□□□□ -1.38
SNCA-201ENST00000336904 IGLV4-3A0A075B6K6 122 aa6.4□□□□□ -1.38
SNCA-201ENST00000336904 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
SNCA-201ENST00000336904 E9PLD3 99 aa6.4□□□□□ -1.38
SNCA-201ENST00000336904 H7C2G1 150 aa6.4□□□□□ -1.38
SNCA-201ENST00000336904 ZNF415Q09FC8 603 aa6.4□□□□□ -1.38
SNCA-201ENST00000336904 NOP10Q9NPE3 64 aaKnown RBP6.4□□□□□ -1.38
SNCA-201ENST00000336904 LOC100131303A0A0U1RQF7 123 aa6.4□□□□□ -1.39
SNCA-201ENST00000336904 C12orf74Q32Q52 190 aa6.4□□□□□ -1.39
SNCA-201ENST00000336904 LINC00467Q9BRT7 94 aa6.4□□□□□ -1.39
SNCA-201ENST00000336904 KRTAP10-3P60369 221 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 TRBV7-3A0A075B6L6 115 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 H3BMG7 143 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 Q6ZUT4 128 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 VCX2Q9H322 139 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 K7EP34 96 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 GAGE7O76087 117 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 GAGE12FP0CL80 117 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 GAGE12GP0CL81 117 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 GAGE12IP0CL82 117 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 FABP2P12104 132 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
SNCA-201ENST00000336904 IGKV3OR2-268A0A0C4DH90 116 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 TRBV6-5A0A0K0K1A5 114 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 GAGE12JA6NER3 117 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 SPINK8P0C7L1 97 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 GAGE4Q13068 117 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 GAGE5Q13069 117 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 HIGD1BQ9P298 99 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 ZNF22P17026 224 aaPredicted RBP6.38□□□□□ -1.39
SNCA-201ENST00000336904 RBX1P62877 108 aa6.38□□□□□ -1.39
SNCA-201ENST00000336904 TSSC4Q9Y5U2 329 aaPredicted RBP6.38□□□□□ -1.39
SNCA-201ENST00000336904 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 IGLL5B9A064 214 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 INAFM1C9JVW0 142 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 J3QQQ9 107 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 LINC00694P0DN24 101 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 RPL24P83731 157 aaKnown RBP6.37□□□□□ -1.39
SNCA-201ENST00000336904 FHL3Q13643 280 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 OCIAD2Q56VL3 154 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 DAND5Q8N907 189 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 TIMM17AQ99595 171 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 TM2D2Q9BX73 214 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 PGPEP1Q9NXJ5 209 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 DEFB4AO15263 64 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 LY6G6DO95868 133 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 LGALS3P17931 250 aaKnown RBP6.37□□□□□ -1.39
SNCA-201ENST00000336904 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
SNCA-201ENST00000336904 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
SNCA-201ENST00000336904 A8MWV9 139 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 GIG44P09565 113 aaPredicted RBP6.36□□□□□ -1.39
SNCA-201ENST00000336904 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 CHCHD7Q9BUK0 85 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 A0A0J9YY99 117 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 HERVK_113P61574 105 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 LINC00482Q8N8I6 264 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 RHODO00212 210 aa6.36□□□□□ -1.39
SNCA-201ENST00000336904 TRGV2A0A075B6R0 118 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 RNASE1P07998 156 aaKnown RBP6.35□□□□□ -1.39
SNCA-201ENST00000336904 DEFB130BP0DP73 79 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 DEFB130AP0DP74 79 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 WFDC2Q14508 124 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 SH2D6Q7Z4S9 175 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 TMEM86BQ8N661 226 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 ZNF418Q8TF45 676 aaPredicted RBP6.35□□□□□ -1.39
SNCA-201ENST00000336904 F8P00451 2351 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 A0A096LPF7 62 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 TRAV13-1A0A0B4J241 112 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 RHOHQ15669 191 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.35□□□□□ -1.39
SNCA-201ENST00000336904 SLC25A29Q8N8R3 303 aa6.35□□□□□ -1.39
SNCA-201ENST00000336904 PF4P02776 101 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 RPL32P62910 135 aaKnown RBP6.34□□□□□ -1.39
SNCA-201ENST00000336904 COTL1Q14019 142 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 C10orf126Q8N4M7 172 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 AMELXQ99217 191 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 TMEM223A0PJW6 202 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 PRSS2P07478 247 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 COX6A2Q02221 97 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 DGAT2L7PQ6IED9 249 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 STAB1Q9NY15 2570 aa6.34□□□□□ -1.39
SNCA-201ENST00000336904 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.4
SNCA-201ENST00000336904 A8MTW9 85 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms