RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 Q8N1X5 172 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 LINC00269Q8N2A0 174 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 RMI2Q96E14 147 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 RNF185Q96GF1 192 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 COX11Q9Y6N1 276 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 FAM231BA6NCW3 169 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 CRPP02741 224 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 FRZBQ92765 325 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 TMEM243Q9BU79 118 aa9.8□□□□□ -0.84
KATNA1-201ENST00000335643 LINC01620Q4KN68 170 aa9.79□□□□□ -0.84
KATNA1-201ENST00000335643 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
KATNA1-201ENST00000335643 SMIM15Q7Z3B0 74 aa9.79□□□□□ -0.84
KATNA1-201ENST00000335643 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
KATNA1-201ENST00000335643 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
KATNA1-201ENST00000335643 FAM30AQ9NZY2 134 aa9.79□□□□□ -0.84
KATNA1-201ENST00000335643 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 RPS10P46783 165 aaKnown RBP9.78□□□□□ -0.84
KATNA1-201ENST00000335643 PKIAP61925 76 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 COTL1Q14019 142 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 AMN1Q8IY45 258 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 BORCS7Q96B45 105 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 ANAPC16Q96DE5 110 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 SMDT1Q9H4I9 107 aa9.78□□□□□ -0.84
KATNA1-201ENST00000335643 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
KATNA1-201ENST00000335643 RAB4AP20338 218 aa9.77□□□□□ -0.85
KATNA1-201ENST00000335643 AMTP48728 403 aa9.77□□□□□ -0.85
KATNA1-201ENST00000335643 SMIM27A0A1W2PRY6 76 aa9.76□□□□□ -0.85
KATNA1-201ENST00000335643 A6NJY4 79 aa9.76□□□□□ -0.85
KATNA1-201ENST00000335643 SMKR1H3BMG3 65 aa9.76□□□□□ -0.85
KATNA1-201ENST00000335643 HLA-DQA1P01909 254 aa9.76□□□□□ -0.85
KATNA1-201ENST00000335643 REG3AQ06141 175 aa9.76□□□□□ -0.85
KATNA1-201ENST00000335643 MIAQ16674 131 aa9.76□□□□□ -0.85
KATNA1-201ENST00000335643 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
KATNA1-201ENST00000335643 IGLV10-54A0A075B6I4 117 aa9.75□□□□□ -0.85
KATNA1-201ENST00000335643 TRBV6-5A0A0K0K1A5 114 aa9.75□□□□□ -0.85
KATNA1-201ENST00000335643 A0A1B0GUV1 79 aa9.75□□□□□ -0.85
KATNA1-201ENST00000335643 NCR2O95944 276 aa9.75□□□□□ -0.85
KATNA1-201ENST00000335643 NAT8BQ9UHF3 227 aa9.75□□□□□ -0.85
KATNA1-201ENST00000335643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.75□□□□□ -0.85
KATNA1-201ENST00000335643 IGKV2-29A2NJV5 120 aaPredicted RBP9.75□□□□□ -0.85
KATNA1-201ENST00000335643 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
KATNA1-201ENST00000335643 USP17L23D6RBM5 183 aa9.73□□□□□ -0.85
KATNA1-201ENST00000335643 UBE2L6O14933 153 aa9.73□□□□□ -0.85
KATNA1-201ENST00000335643 TSHBP01222 138 aa9.73□□□□□ -0.85
KATNA1-201ENST00000335643 RIGQ13278 110 aa9.73□□□□□ -0.85
KATNA1-201ENST00000335643 TMEM70Q9BUB7 260 aa9.73□□□□□ -0.85
KATNA1-201ENST00000335643 MYCBP2O75592 4640 aa9.73□□□□□ -0.85
KATNA1-201ENST00000335643 APCSP02743 223 aa9.72□□□□□ -0.85
KATNA1-201ENST00000335643 POLR2KP53803 58 aaKnown RBP9.72□□□□□ -0.85
KATNA1-201ENST00000335643 IFITM2Q01629 132 aa9.72□□□□□ -0.85
KATNA1-201ENST00000335643 Q6ZSA8 131 aa9.72□□□□□ -0.85
KATNA1-201ENST00000335643 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
KATNA1-201ENST00000335643 I3L3M4 83 aa9.71□□□□□ -0.85
KATNA1-201ENST00000335643 CAMPP49913 170 aa9.71□□□□□ -0.85
KATNA1-201ENST00000335643 NRACQ8N912 160 aa9.71□□□□□ -0.85
KATNA1-201ENST00000335643 MRAP2Q96G30 205 aa9.71□□□□□ -0.85
KATNA1-201ENST00000335643 ST20Q9HBF5 79 aa9.71□□□□□ -0.85
KATNA1-201ENST00000335643 PRSS1P07477 247 aa9.71□□□□□ -0.86
KATNA1-201ENST00000335643 PMCHP20382 165 aa9.71□□□□□ -0.86
KATNA1-201ENST00000335643 MRPL51Q4U2R6 128 aaKnown RBP9.71□□□□□ -0.86
KATNA1-201ENST00000335643 TRBV27A0A0K0K1C4 114 aa9.7□□□□□ -0.86
KATNA1-201ENST00000335643 FGF6P10767 208 aa9.7□□□□□ -0.86
KATNA1-201ENST00000335643 ESDP10768 282 aa9.7□□□□□ -0.86
KATNA1-201ENST00000335643 FAM104BQ5XKR9 115 aa9.7□□□□□ -0.86
KATNA1-201ENST00000335643 MRPL54Q6P161 138 aaKnown RBP9.7□□□□□ -0.86
KATNA1-201ENST00000335643 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
KATNA1-201ENST00000335643 A0A1B0GXF2 115 aa9.69□□□□□ -0.86
KATNA1-201ENST00000335643 EPM2AB3EWF7 344 aa9.69□□□□□ -0.86
KATNA1-201ENST00000335643 RAB14P61106 215 aa9.69□□□□□ -0.86
KATNA1-201ENST00000335643 CLLU1Q5K131 121 aa9.69□□□□□ -0.86
KATNA1-201ENST00000335643 Q5VSD8 79 aa9.69□□□□□ -0.86
KATNA1-201ENST00000335643 RNASEKQ6P5S7 137 aaKnown RBP9.68□□□□□ -0.86
KATNA1-201ENST00000335643 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
KATNA1-201ENST00000335643 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
KATNA1-201ENST00000335643 H7C423 109 aa9.67□□□□□ -0.86
KATNA1-201ENST00000335643 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
KATNA1-201ENST00000335643 C14orf177Q52M58 125 aa9.67□□□□□ -0.86
KATNA1-201ENST00000335643 ADCYAP1P18509 176 aa9.66□□□□□ -0.86
KATNA1-201ENST00000335643 HBBP68871 147 aa9.66□□□□□ -0.86
KATNA1-201ENST00000335643 HERC1Q15751 4861 aa9.65□□□□□ -0.86
KATNA1-201ENST00000335643 A0A1B0GW15 77 aa9.65□□□□□ -0.86
KATNA1-201ENST00000335643 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
KATNA1-201ENST00000335643 GAGE12HA6NDE8 117 aa9.64□□□□□ -0.87
KATNA1-201ENST00000335643 D6R8Y8 96 aa9.64□□□□□ -0.87
KATNA1-201ENST00000335643 VCYO14598 125 aa9.64□□□□□ -0.87
KATNA1-201ENST00000335643 SLPIP03973 132 aa9.64□□□□□ -0.87
KATNA1-201ENST00000335643 C15orf56Q8N910 161 aa9.64□□□□□ -0.87
KATNA1-201ENST00000335643 TRBV24-1A0A075B6N3 115 aa9.63□□□□□ -0.87
KATNA1-201ENST00000335643 C7orf77A4D0Y5 90 aa9.63□□□□□ -0.87
KATNA1-201ENST00000335643 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
KATNA1-201ENST00000335643 CKS2P33552 79 aa9.63□□□□□ -0.87
KATNA1-201ENST00000335643 PNRC1Q12796 327 aaPredicted RBP9.63□□□□□ -0.87
KATNA1-201ENST00000335643 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
KATNA1-201ENST00000335643 CHCHD10Q8WYQ3 142 aaPredicted RBP9.63□□□□□ -0.87
KATNA1-201ENST00000335643 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
KATNA1-201ENST00000335643 PPP1R2P9O14990 202 aa9.63□□□□□ -0.87
KATNA1-201ENST00000335643 TNFRSF6BO95407 300 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms