RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 P0DMU3 169 aa11.64□□□□□ -0.55
SHOX-201ENST00000334060 FAM231AP0DMU4 169 aa11.64□□□□□ -0.55
SHOX-201ENST00000334060 FAM231CP0DMU5 169 aa11.64□□□□□ -0.55
SHOX-201ENST00000334060 LINC00315P59091 139 aa11.64□□□□□ -0.55
SHOX-201ENST00000334060 DAD1P61803 113 aa11.64□□□□□ -0.55
SHOX-201ENST00000334060 KIF25-AS1Q9Y6Z4 181 aa11.64□□□□□ -0.55
SHOX-201ENST00000334060 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
SHOX-201ENST00000334060 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
SHOX-201ENST00000334060 A0A1B0GW15 77 aa11.63□□□□□ -0.55
SHOX-201ENST00000334060 LYRM9A8MSI8 78 aa11.63□□□□□ -0.55
SHOX-201ENST00000334060 IGHV4-4A0A075B6R2 117 aa11.63□□□□□ -0.55
SHOX-201ENST00000334060 TRAV8-6A0A0B4J262 113 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 J3QR89 54 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 HSD52Q0P140 79 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 LGALS9BQ3B8N2 356 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
SHOX-201ENST00000334060 A0A1B0GV72 72 aa11.61□□□□□ -0.55
SHOX-201ENST00000334060 RS1O15537 224 aa11.61□□□□□ -0.55
SHOX-201ENST00000334060 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
SHOX-201ENST00000334060 GATA1P15976 413 aaPredicted RBP11.61□□□□□ -0.55
SHOX-201ENST00000334060 FHL2Q14192 279 aa11.61□□□□□ -0.55
SHOX-201ENST00000334060 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
SHOX-201ENST00000334060 MTURNQ8N3F0 131 aa11.61□□□□□ -0.55
SHOX-201ENST00000334060 A0A0J9YY99 117 aa11.6□□□□□ -0.55
SHOX-201ENST00000334060 RNF185Q96GF1 192 aa11.6□□□□□ -0.55
SHOX-201ENST00000334060 DYNC2H1Q8NCM8 4307 aaKnown RBP11.6□□□□□ -0.55
SHOX-201ENST00000334060 MGPP08493 103 aa11.59□□□□□ -0.55
SHOX-201ENST00000334060 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
SHOX-201ENST00000334060 URB1-AS1Q96HZ7 61 aa11.59□□□□□ -0.55
SHOX-201ENST00000334060 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
SHOX-201ENST00000334060 CACNG7P62955 275 aa11.59□□□□□ -0.55
SHOX-201ENST00000334060 SYT8Q8NBV8 401 aa11.59□□□□□ -0.55
SHOX-201ENST00000334060 TRAV4A0A0B4J268 109 aa11.58□□□□□ -0.56
SHOX-201ENST00000334060 F5H768 121 aa11.58□□□□□ -0.56
SHOX-201ENST00000334060 NCR2O95944 276 aa11.58□□□□□ -0.56
SHOX-201ENST00000334060 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
SHOX-201ENST00000334060 PTH2Q96A98 100 aa11.58□□□□□ -0.56
SHOX-201ENST00000334060 ZFAND6Q6FIF0 208 aa11.57□□□□□ -0.56
SHOX-201ENST00000334060 C2orf91Q6ZV80 131 aa11.57□□□□□ -0.56
SHOX-201ENST00000334060 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
SHOX-201ENST00000334060 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
SHOX-201ENST00000334060 FABP2P12104 132 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 RIGQ13278 110 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 ZNF56Q15929 161 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 A8MWV9 139 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 ATP5G1P05496 136 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 LGALS9CQ6DKI2 356 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
SHOX-201ENST00000334060 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
SHOX-201ENST00000334060 TRAV26-1A0A087WT03 109 aa11.55□□□□□ -0.56
SHOX-201ENST00000334060 DEFB131BA0A096LNP1 70 aa11.55□□□□□ -0.56
SHOX-201ENST00000334060 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
SHOX-201ENST00000334060 C18orf15Q96N68 181 aa11.55□□□□□ -0.56
SHOX-201ENST00000334060 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
SHOX-201ENST00000334060 A0A096LPF7 62 aa11.54□□□□□ -0.56
SHOX-201ENST00000334060 TRGV4A0A0C4DH28 118 aa11.54□□□□□ -0.56
SHOX-201ENST00000334060 A0A1W2PPM0 123 aa11.54□□□□□ -0.56
SHOX-201ENST00000334060 F5H697 171 aa11.54□□□□□ -0.56
SHOX-201ENST00000334060 MRPL51Q4U2R6 128 aaKnown RBP11.54□□□□□ -0.56
SHOX-201ENST00000334060 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
SHOX-201ENST00000334060 FAM104BQ5XKR9 115 aa11.53□□□□□ -0.56
SHOX-201ENST00000334060 CRYBA4P53673 196 aa11.52□□□□□ -0.56
SHOX-201ENST00000334060 PIK3CD-AS1Q5SR53 167 aa11.52□□□□□ -0.56
SHOX-201ENST00000334060 SPCS1Q9Y6A9 102 aa11.52□□□□□ -0.56
SHOX-201ENST00000334060 FGF6P10767 208 aa11.52□□□□□ -0.57
SHOX-201ENST00000334060 HIGD1BQ9P298 99 aa11.52□□□□□ -0.57
SHOX-201ENST00000334060 HHLA3Q9XRX5 114 aa11.52□□□□□ -0.57
SHOX-201ENST00000334060 M0QY20 66 aa11.51□□□□□ -0.57
SHOX-201ENST00000334060 F8W1H4 67 aa11.5□□□□□ -0.57
SHOX-201ENST00000334060 H3BUT2 72 aa11.5□□□□□ -0.57
SHOX-201ENST00000334060 SMIM13P0DJ93 91 aa11.5□□□□□ -0.57
SHOX-201ENST00000334060 TEX48A0A1B0GUV7 120 aa11.5□□□□□ -0.57
SHOX-201ENST00000334060 D6R8Y8 96 aa11.5□□□□□ -0.57
SHOX-201ENST00000334060 ZFP2Q6ZN57 461 aa11.5□□□□□ -0.57
SHOX-201ENST00000334060 TRAV10A0A0B4J240 114 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 GAGE12JA6NER3 117 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 IGLL5B9A064 214 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 GAGE4Q13068 117 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 GAGE5Q13069 117 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 GAGE13Q4V321 117 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 ERASQ7Z444 233 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 NEXN-AS1Q8NBZ9 246 aa11.49□□□□□ -0.57
SHOX-201ENST00000334060 K7EQD1 137 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 GYPEP15421 78 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 PAX4O43316 350 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 NPYP01303 97 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 LINC00173Q6ZV60 143 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 NRACQ8N912 160 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 PRSS3P2Q8NHM4 247 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 PRO0255Q9UI72 69 aa11.48□□□□□ -0.57
SHOX-201ENST00000334060 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
SHOX-201ENST00000334060 RHODO00212 210 aa11.47□□□□□ -0.57
SHOX-201ENST00000334060 ZNRF2Q8NHG8 242 aa11.47□□□□□ -0.57
SHOX-201ENST00000334060 MUC7Q8TAX7 377 aa11.46□□□□□ -0.58
SHOX-201ENST00000334060 WWC2-AS2Q96NR7 200 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms