RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 Q6YL49 198 aa9.04□□□□□ -0.96
VPS33B-201ENST00000333371 C10orf126Q8N4M7 172 aa9.04□□□□□ -0.96
VPS33B-201ENST00000333371 SPXQ9BT56 116 aa9.04□□□□□ -0.96
VPS33B-201ENST00000333371 I3L3M4 83 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 RHODO00212 210 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 JMJD1CQ15652 2540 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 TRAV8-3A0A0A6YYJ7 113 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 A8MZ25 164 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 SLURP1P55000 103 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 PRO1854Q9UHT4 67 aa9.03□□□□□ -0.96
VPS33B-201ENST00000333371 FSHBP01225 129 aa9.02□□□□□ -0.96
VPS33B-201ENST00000333371 ODF3Q96PU9 254 aa9.02□□□□□ -0.96
VPS33B-201ENST00000333371 CDIP1Q9H305 208 aa9.02□□□□□ -0.96
VPS33B-201ENST00000333371 VCX2Q9H322 139 aa9.02□□□□□ -0.96
VPS33B-201ENST00000333371 TMEM89A2RUT3 159 aa9.02□□□□□ -0.97
VPS33B-201ENST00000333371 LEPROTO15243 131 aa9.02□□□□□ -0.97
VPS33B-201ENST00000333371 DEFB131AP59861 70 aa9.02□□□□□ -0.97
VPS33B-201ENST00000333371 RHOHQ15669 191 aa9.02□□□□□ -0.97
VPS33B-201ENST00000333371 TCTEX1D4Q5JR98 221 aa9.02□□□□□ -0.97
VPS33B-201ENST00000333371 Q6ZSN1 163 aa9.02□□□□□ -0.97
VPS33B-201ENST00000333371 ELANEP08246 267 aa9.01□□□□□ -0.97
VPS33B-201ENST00000333371 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
VPS33B-201ENST00000333371 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
VPS33B-201ENST00000333371 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
VPS33B-201ENST00000333371 CD28P10747 220 aa9.01□□□□□ -0.97
VPS33B-201ENST00000333371 NPC2P61916 151 aa9.01□□□□□ -0.97
VPS33B-201ENST00000333371 ZNF702PQ9H963 129 aa9□□□□□ -0.97
VPS33B-201ENST00000333371 IGHV3-38A0A0C4DH36 116 aa9□□□□□ -0.97
VPS33B-201ENST00000333371 MT-ATP8P03928 68 aa9□□□□□ -0.97
VPS33B-201ENST00000333371 ANKRD29Q8N6D5 301 aa9□□□□□ -0.97
VPS33B-201ENST00000333371 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
VPS33B-201ENST00000333371 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
VPS33B-201ENST00000333371 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
VPS33B-201ENST00000333371 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-201ENST00000333371 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
VPS33B-201ENST00000333371 IGKV2-29A2NJV5 120 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-201ENST00000333371 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
VPS33B-201ENST00000333371 Q6ZSV7 163 aa8.99□□□□□ -0.97
VPS33B-201ENST00000333371 CCDC168Q8NDH2 2452 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 APCP25054 2843 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 TRGV11A0A075B6L2 103 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 XGP55808 180 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 TEN1Q86WV5 123 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 C9JAW5 83 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 ATP6V0E2Q8NHE4 81 aa8.98□□□□□ -0.97
VPS33B-201ENST00000333371 A8MWV9 139 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 PRSS2P07478 247 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 Q1RN00 199 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 LYRM7Q5U5X0 104 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 TMEM61Q8N0U2 210 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 TIMM21Q9BVV7 248 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
VPS33B-201ENST00000333371 SPINK8P0C7L1 97 aa8.96□□□□□ -0.97
VPS33B-201ENST00000333371 SCGB1A1P11684 91 aa8.96□□□□□ -0.97
VPS33B-201ENST00000333371 KRTAP1-3Q8IUG1 177 aa8.96□□□□□ -0.97
VPS33B-201ENST00000333371 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.97
VPS33B-201ENST00000333371 UBE2E2Q96LR5 201 aa8.96□□□□□ -0.97
VPS33B-201ENST00000333371 ERG28Q9UKR5 140 aa8.96□□□□□ -0.97
VPS33B-201ENST00000333371 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
VPS33B-201ENST00000333371 H3BMM0 161 aa8.96□□□□□ -0.98
VPS33B-201ENST00000333371 M0R2P5 195 aa8.96□□□□□ -0.98
VPS33B-201ENST00000333371 KHDC1LQ5JSQ8 128 aa8.96□□□□□ -0.98
VPS33B-201ENST00000333371 HIST2H2BCQ6DN03 193 aa8.96□□□□□ -0.98
VPS33B-201ENST00000333371 SLC25A20O43772 301 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 WFDC11Q8NEX6 87 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 LITAFQ99732 161 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 SETXQ7Z333 2677 aaKnown RBP8.95□□□□□ -0.98
VPS33B-201ENST00000333371 ITPR3Q14573 2671 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 SBSPONQ8IVN8 264 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 Q6ZUT4 128 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 DAND5Q8N907 189 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 LINC00467Q9BRT7 94 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 CHCHD7Q9BUK0 85 aa8.95□□□□□ -0.98
VPS33B-201ENST00000333371 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
VPS33B-201ENST00000333371 A0A1B0GV72 72 aa8.94□□□□□ -0.98
VPS33B-201ENST00000333371 CKS1BP61024 79 aa8.94□□□□□ -0.98
VPS33B-201ENST00000333371 A0A0B4J2C4 111 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 TEX29Q8N6K0 151 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 LINC01587Q99440 93 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 TRIAP1O43715 76 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 CRYBA4P53673 196 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
VPS33B-201ENST00000333371 RNF152Q8N8N0 203 aa8.92□□□□□ -0.98
VPS33B-201ENST00000333371 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
VPS33B-201ENST00000333371 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
VPS33B-201ENST00000333371 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
VPS33B-201ENST00000333371 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.92□□□□□ -0.98
VPS33B-201ENST00000333371 TENM4Q6N022 2769 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 J3QKU1 62 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 Q8N2B8 174 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 C11orf44Q8N8P7 122 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
VPS33B-201ENST00000333371 MAP6D1Q9H9H5 199 aa8.91□□□□□ -0.98
VPS33B-201ENST00000333371 FLNAP21333 2647 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms