RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ODF3Q96PU9 254 aa9.71□□□□□ -0.86
VSTM4-202ENST00000332853 BRCA2P51587 3418 aa9.7□□□□□ -0.86
VSTM4-202ENST00000332853 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
VSTM4-202ENST00000332853 PSMG3-AS1Q96PY0 264 aa9.7□□□□□ -0.86
VSTM4-202ENST00000332853 HIGD1BQ9P298 99 aa9.7□□□□□ -0.86
VSTM4-202ENST00000332853 LINC00467Q9BRT7 94 aa9.7□□□□□ -0.86
VSTM4-202ENST00000332853 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
VSTM4-202ENST00000332853 MKI67P46013 3256 aaKnown RBP9.7□□□□□ -0.86
VSTM4-202ENST00000332853 TLN1Q9Y490 2541 aaKnown RBP9.7□□□□□ -0.86
VSTM4-202ENST00000332853 GAGE12HA6NDE8 117 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 RS1O15537 224 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 INAFM2P0DMQ5 153 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 LY6G6DO95868 133 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 CAMK2N2Q96S95 79 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 IGLV1-40P01703 118 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 C15orf53Q8NAA6 179 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 RMI2Q96E14 147 aa9.69□□□□□ -0.86
VSTM4-202ENST00000332853 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 NCR3O14931 201 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 WFDC2Q14508 124 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 U3KQK5 164 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 PRRC2AP48634 2157 aaKnown RBP9.68□□□□□ -0.86
VSTM4-202ENST00000332853 HIVEP3Q5T1R4 2406 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 NEXN-AS1Q8NBZ9 246 aa9.68□□□□□ -0.86
VSTM4-202ENST00000332853 RNASE3P12724 160 aaKnown RBP9.67□□□□□ -0.86
VSTM4-202ENST00000332853 SMR3AQ99954 134 aa9.67□□□□□ -0.86
VSTM4-202ENST00000332853 CHD7Q9P2D1 2997 aa9.67□□□□□ -0.86
VSTM4-202ENST00000332853 CFAP126Q5VTH2 177 aa9.67□□□□□ -0.86
VSTM4-202ENST00000332853 TRAV26-1A0A087WT03 109 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 M0QY20 66 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 FAM222AQ5U5X8 452 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 PRO0255Q9UI72 69 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 IFITM1P13164 125 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 INSL3P51460 131 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 HAMPP81172 84 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 LINC01006Q8NI28 216 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 TMEM126AQ9H061 195 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
VSTM4-202ENST00000332853 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.86
VSTM4-202ENST00000332853 DSCR8Q96T75 97 aa9.65□□□□□ -0.86
VSTM4-202ENST00000332853 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
VSTM4-202ENST00000332853 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
VSTM4-202ENST00000332853 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.86
VSTM4-202ENST00000332853 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.87
VSTM4-202ENST00000332853 CCL18P55774 89 aa9.64□□□□□ -0.87
VSTM4-202ENST00000332853 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
VSTM4-202ENST00000332853 ANKRD29Q8N6D5 301 aa9.64□□□□□ -0.87
VSTM4-202ENST00000332853 NRACQ8N912 160 aa9.64□□□□□ -0.87
VSTM4-202ENST00000332853 TRBV10-1A0A0K0K1A3 114 aa9.64□□□□□ -0.87
VSTM4-202ENST00000332853 BPTFQ12830 3046 aa9.64□□□□□ -0.87
VSTM4-202ENST00000332853 NAV2Q8IVL1 2488 aa9.63□□□□□ -0.87
VSTM4-202ENST00000332853 IGLV4-3A0A075B6K6 122 aa9.63□□□□□ -0.87
VSTM4-202ENST00000332853 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
VSTM4-202ENST00000332853 CCDC168Q8NDH2 2452 aa9.63□□□□□ -0.87
VSTM4-202ENST00000332853 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
VSTM4-202ENST00000332853 SORL1Q92673 2214 aa9.63□□□□□ -0.87
VSTM4-202ENST00000332853 RNASE8Q8TDE3 154 aaKnown RBP9.63□□□□□ -0.87
VSTM4-202ENST00000332853 PLA2G2AP14555 144 aa9.62□□□□□ -0.87
VSTM4-202ENST00000332853 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
VSTM4-202ENST00000332853 UBL5Q9BZL1 73 aa9.62□□□□□ -0.87
VSTM4-202ENST00000332853 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
VSTM4-202ENST00000332853 PCSK5Q92824 1860 aa9.62□□□□□ -0.87
VSTM4-202ENST00000332853 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
VSTM4-202ENST00000332853 UBE2BP63146 152 aa9.61□□□□□ -0.87
VSTM4-202ENST00000332853 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
VSTM4-202ENST00000332853 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
VSTM4-202ENST00000332853 KLLNB2CW77 178 aa9.61□□□□□ -0.87
VSTM4-202ENST00000332853 MRGPRG-AS1Q2M3A8 158 aa9.61□□□□□ -0.87
VSTM4-202ENST00000332853 LINC01620Q4KN68 170 aa9.61□□□□□ -0.87
VSTM4-202ENST00000332853 PTH2Q96A98 100 aa9.6□□□□□ -0.87
VSTM4-202ENST00000332853 A8MZ25 164 aa9.6□□□□□ -0.87
VSTM4-202ENST00000332853 LINC00310P59036 64 aa9.6□□□□□ -0.87
VSTM4-202ENST00000332853 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
VSTM4-202ENST00000332853 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
VSTM4-202ENST00000332853 HIGD2BQ4VC39 106 aa9.6□□□□□ -0.87
VSTM4-202ENST00000332853 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
VSTM4-202ENST00000332853 CRYBA4P53673 196 aa9.59□□□□□ -0.87
VSTM4-202ENST00000332853 NDUFA1O15239 70 aa9.59□□□□□ -0.87
VSTM4-202ENST00000332853 MIAQ16674 131 aa9.58□□□□□ -0.88
VSTM4-202ENST00000332853 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
VSTM4-202ENST00000332853 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
VSTM4-202ENST00000332853 TSHBP01222 138 aa9.58□□□□□ -0.88
VSTM4-202ENST00000332853 C11orf45Q8TAV5 145 aa9.58□□□□□ -0.88
VSTM4-202ENST00000332853 Q8N976 141 aa9.57□□□□□ -0.88
VSTM4-202ENST00000332853 TCL1BO95988 128 aa9.57□□□□□ -0.88
VSTM4-202ENST00000332853 REG3AQ06141 175 aa9.57□□□□□ -0.88
VSTM4-202ENST00000332853 LECT2O14960 151 aa9.57□□□□□ -0.88
VSTM4-202ENST00000332853 URB1-AS1Q96HZ7 61 aa9.57□□□□□ -0.88
VSTM4-202ENST00000332853 CRYGDP07320 174 aa9.56□□□□□ -0.88
VSTM4-202ENST00000332853 C9orf153Q5TBE3 101 aa9.56□□□□□ -0.88
VSTM4-202ENST00000332853 BBC3Q96PG8 261 aaPredicted RBP9.56□□□□□ -0.88
VSTM4-202ENST00000332853 ANKRD11Q6UB99 2663 aaPredicted RBP9.56□□□□□ -0.88
VSTM4-202ENST00000332853 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms