RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 SDHAF1A6NFY7 115 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 F8W036 122 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 UBE2L6O14933 153 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 NCR2O95944 276 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 PMCHP20382 165 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 AMTP48728 403 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 DNAH11Q96DT5 4516 aa9.36□□□□□ -0.91
LIMS1-201ENST00000332345 I3L3M4 83 aa9.35□□□□□ -0.91
LIMS1-201ENST00000332345 CRPP02741 224 aa9.35□□□□□ -0.91
LIMS1-201ENST00000332345 RBX1P62877 108 aa9.35□□□□□ -0.91
LIMS1-201ENST00000332345 HBBP68871 147 aa9.35□□□□□ -0.91
LIMS1-201ENST00000332345 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
LIMS1-201ENST00000332345 Q8N976 141 aa9.35□□□□□ -0.91
LIMS1-201ENST00000332345 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 LINC00862A6NCI5 91 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 LRCOL1A6NCL2 159 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
LIMS1-201ENST00000332345 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
LIMS1-201ENST00000332345 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
LIMS1-201ENST00000332345 CDPF1Q6NVV7 123 aa9.33□□□□□ -0.92
LIMS1-201ENST00000332345 ENHOQ6UWT2 76 aa9.33□□□□□ -0.92
LIMS1-201ENST00000332345 COMMD7Q86VX2 200 aa9.33□□□□□ -0.92
LIMS1-201ENST00000332345 H7C423 109 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 VCYO14598 125 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 APCSP02743 223 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 CKS2P33552 79 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
LIMS1-201ENST00000332345 MIAQ16674 131 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
LIMS1-201ENST00000332345 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
LIMS1-201ENST00000332345 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
LIMS1-201ENST00000332345 A0A1B0GXF2 115 aa9.31□□□□□ -0.92
LIMS1-201ENST00000332345 SMKR1H3BMG3 65 aa9.31□□□□□ -0.92
LIMS1-201ENST00000332345 RPS10P46783 165 aaKnown RBP9.31□□□□□ -0.92
LIMS1-201ENST00000332345 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
LIMS1-201ENST00000332345 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
LIMS1-201ENST00000332345 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 SUMO2P61956 95 aaKnown RBP9.3□□□□□ -0.92
LIMS1-201ENST00000332345 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 Q8N814 137 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 NRACQ8N912 160 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 IMMP2LQ96T52 175 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 CTDSP1Q9GZU7 261 aa9.3□□□□□ -0.92
LIMS1-201ENST00000332345 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 PPBPP02775 128 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 REG3AQ06141 175 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 MAPKAPK5-AS1Q8N8E1 139 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
LIMS1-201ENST00000332345 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 KIR2DL4Q99706 377 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 C20orf78Q9BR46 151 aa9.29□□□□□ -0.92
LIMS1-201ENST00000332345 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
LIMS1-201ENST00000332345 TRAV8-4A0A0B4J246 113 aa9.28□□□□□ -0.92
LIMS1-201ENST00000332345 TSHBP01222 138 aa9.28□□□□□ -0.92
LIMS1-201ENST00000332345 FCER1GP30273 86 aa9.28□□□□□ -0.92
LIMS1-201ENST00000332345 RNASEKQ6P5S7 137 aaKnown RBP9.28□□□□□ -0.92
LIMS1-201ENST00000332345 TMEM242Q9NWH2 141 aa9.28□□□□□ -0.92
LIMS1-201ENST00000332345 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
LIMS1-201ENST00000332345 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
LIMS1-201ENST00000332345 D6R8Y8 96 aa9.27□□□□□ -0.93
LIMS1-201ENST00000332345 LECT2O14960 151 aa9.27□□□□□ -0.93
LIMS1-201ENST00000332345 ESDP10768 282 aa9.27□□□□□ -0.93
LIMS1-201ENST00000332345 FUSP35637 526 aaKnown RBP eCLIP9.27□□□□□ -0.93
LIMS1-201ENST00000332345 CLPSL2Q6UWE3 100 aa9.27□□□□□ -0.93
LIMS1-201ENST00000332345 TMEM101Q96IK0 257 aa9.27□□□□□ -0.93
LIMS1-201ENST00000332345 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 PHOX2AO14813 284 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 TCAPO15273 167 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 FGF6P10767 208 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 ZNF25P17030 456 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-201ENST00000332345 GCSHP23434 173 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
LIMS1-201ENST00000332345 C10orf91Q5T1B1 145 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 DNAH5Q8TE73 4624 aa9.26□□□□□ -0.93
LIMS1-201ENST00000332345 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
LIMS1-201ENST00000332345 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
LIMS1-201ENST00000332345 WFDC2Q14508 124 aa9.25□□□□□ -0.93
LIMS1-201ENST00000332345 C14orf177Q52M58 125 aa9.25□□□□□ -0.93
LIMS1-201ENST00000332345 LRP1BQ9NZR2 4599 aa9.25□□□□□ -0.93
LIMS1-201ENST00000332345 TRAV9-1A0A075B6T8 112 aa9.24□□□□□ -0.93
LIMS1-201ENST00000332345 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
LIMS1-201ENST00000332345 S100PP25815 95 aa9.24□□□□□ -0.93
LIMS1-201ENST00000332345 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
LIMS1-201ENST00000332345 PRELID3AQ96N28 172 aa9.24□□□□□ -0.93
LIMS1-201ENST00000332345 CARHSP1Q9Y2V2 147 aaKnown RBP9.24□□□□□ -0.93
LIMS1-201ENST00000332345 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
LIMS1-201ENST00000332345 HLA-DQA1P01909 254 aa9.23□□□□□ -0.93
LIMS1-201ENST00000332345 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms