RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 TSSC4Q9Y5U2 329 aaPredicted RBP7.42□□□□□ -1.22
PRAMEF1-201ENST00000332296 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 K7EQG2 157 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 M0QY20 66 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 ZNF876PQ49A33 203 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 SPAG8Q99932 426 aaPredicted RBP7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 C19orf73Q9NVV2 129 aa7.41□□□□□ -1.22
PRAMEF1-201ENST00000332296 APOMO95445 188 aa7.4□□□□□ -1.22
PRAMEF1-201ENST00000332296 SYNJ2BPP57105 145 aa7.4□□□□□ -1.22
PRAMEF1-201ENST00000332296 HERVK_113P61574 105 aa7.4□□□□□ -1.22
PRAMEF1-201ENST00000332296 AMELXQ99217 191 aa7.4□□□□□ -1.22
PRAMEF1-201ENST00000332296 VPREB3Q9UKI3 123 aa7.4□□□□□ -1.22
PRAMEF1-201ENST00000332296 IGHV1OR15-1A0A075B7D0 117 aa7.4□□□□□ -1.23
PRAMEF1-201ENST00000332296 P0DMU3 169 aa7.4□□□□□ -1.23
PRAMEF1-201ENST00000332296 FAM231AP0DMU4 169 aa7.4□□□□□ -1.23
PRAMEF1-201ENST00000332296 FAM231CP0DMU5 169 aa7.4□□□□□ -1.23
PRAMEF1-201ENST00000332296 ODF3Q96PU9 254 aa7.4□□□□□ -1.23
PRAMEF1-201ENST00000332296 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.23
PRAMEF1-201ENST00000332296 JMJD1CQ15652 2540 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 RBMY1A1P0DJD3 496 aaKnown RBP7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 RBMY1CP0DJD4 496 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 SNRPD3P62318 126 aaKnown RBP7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 RBMY1FQ15415 496 aaKnown RBP7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 ZNF580Q9UK33 172 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 DNAJC9-AS1A6NH13 148 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 SYT8Q8NBV8 401 aa7.39□□□□□ -1.23
PRAMEF1-201ENST00000332296 NACAE9PAV3 2078 aa7.38□□□□□ -1.23
PRAMEF1-201ENST00000332296 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
PRAMEF1-201ENST00000332296 CFAP126Q5VTH2 177 aa7.38□□□□□ -1.23
PRAMEF1-201ENST00000332296 NDUFA11Q86Y39 141 aa7.38□□□□□ -1.23
PRAMEF1-201ENST00000332296 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
PRAMEF1-201ENST00000332296 ESM1Q9NQ30 184 aa7.38□□□□□ -1.23
PRAMEF1-201ENST00000332296 IGHV3-64A0A075B6Q5 118 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 J3QQQ9 107 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 AZU1P20160 251 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 UBE2D3P61077 147 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 UBE2D2P62837 147 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 TRPT1Q86TN4 253 aaKnown RBP7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 GAGE12HA6NDE8 117 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 CFC1P0CG37 223 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 PSMB2P49721 201 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 RHOHQ15669 191 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 NFE4Q86UQ8 179 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
PRAMEF1-201ENST00000332296 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 TMEM223A0PJW6 202 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 PRM2P04554 102 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 HOXD3P31249 432 aaPredicted RBP7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 PROK1P58294 105 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 SMAGPQ0VAQ4 97 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 TMEM86BQ8N661 226 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 C20orf203Q8NBC4 194 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 ZNF418Q8TF45 676 aaPredicted RBP7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 IGLV4-3A0A075B6K6 122 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 KNCNA6PVL3 124 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 LGALS3P17931 250 aaKnown RBP7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 C18orf65Q6ZTR6 163 aa7.36□□□□□ -1.23
PRAMEF1-201ENST00000332296 A0A0J9YXV3 536 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 J3QR89 54 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 CRLF1O75462 422 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 TCL1BO95988 128 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 HTN1P15515 57 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 DEFB136Q30KP8 78 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 PTH2Q96A98 100 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 C1QTNF4Q9BXJ3 329 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 C2CD3Q4AC94 2353 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 TMEM89A2RUT3 159 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 I3L3M4 83 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 HILS1P60008 231 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 FAM104AQ969W3 186 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 SIGMAR1Q99720 223 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 ZNF702PQ9H963 129 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 Q9UF83 564 aa7.35□□□□□ -1.23
PRAMEF1-201ENST00000332296 RBMY1BA6NDE4 496 aaKnown RBP7.34□□□□□ -1.23
PRAMEF1-201ENST00000332296 RBMY1EA6NEQ0 496 aaKnown RBP7.34□□□□□ -1.23
PRAMEF1-201ENST00000332296 RHODO00212 210 aa7.34□□□□□ -1.23
PRAMEF1-201ENST00000332296 LEPROTO15243 131 aa7.34□□□□□ -1.23
PRAMEF1-201ENST00000332296 RBMY1DP0C7P1 496 aaKnown RBP7.34□□□□□ -1.23
PRAMEF1-201ENST00000332296 SLURP1P55000 103 aa7.34□□□□□ -1.23
PRAMEF1-201ENST00000332296 TRGV11A0A075B6L2 103 aa7.33□□□□□ -1.24
PRAMEF1-201ENST00000332296 FOXI1Q12951 378 aa7.33□□□□□ -1.24
PRAMEF1-201ENST00000332296 TCTEX1D4Q5JR98 221 aa7.33□□□□□ -1.24
PRAMEF1-201ENST00000332296 CEMP1Q6PRD7 247 aaPredicted RBP7.33□□□□□ -1.24
PRAMEF1-201ENST00000332296 C10orf126Q8N4M7 172 aa7.33□□□□□ -1.24
PRAMEF1-201ENST00000332296 RNASE13Q5GAN3 156 aaKnown RBP7.33□□□□□ -1.24
PRAMEF1-201ENST00000332296 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
PRAMEF1-201ENST00000332296 RNASE1P07998 156 aaKnown RBP7.32□□□□□ -1.24
PRAMEF1-201ENST00000332296 DEFB131AP59861 70 aa7.32□□□□□ -1.24
PRAMEF1-201ENST00000332296 ELANEP08246 267 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms