RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 ODF3BA8MYP8 253 aa15.26■□□□□ 0.03
CMTM4-201ENST00000330687 SDIM1Q6ZPB5 146 aa15.26■□□□□ 0.03
CMTM4-201ENST00000330687 TMEM61Q8N0U2 210 aa15.26■□□□□ 0.03
CMTM4-201ENST00000330687 PRM2P04554 102 aa15.26■□□□□ 0.03
CMTM4-201ENST00000330687 WNK1Q9H4A3 2382 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 UQCRQO14949 82 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 MIAQ16674 131 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 SMIM9A6NGZ8 99 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 J3KT08 172 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 BAALC-AS2P0C853 105 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 MINOS1Q5TGZ0 78 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 LY6G5BQ8NDX9 201 aa15.25■□□□□ 0.03
CMTM4-201ENST00000330687 TRBV7-7A0A0K0K1E9 115 aa15.24■□□□□ 0.03
CMTM4-201ENST00000330687 M0QY20 66 aa15.24■□□□□ 0.03
CMTM4-201ENST00000330687 DGAT2L7PQ6IED9 249 aa15.24■□□□□ 0.03
CMTM4-201ENST00000330687 SYNJ2BPP57105 145 aa15.23■□□□□ 0.03
CMTM4-201ENST00000330687 C5orf47Q569G3 176 aa15.23■□□□□ 0.03
CMTM4-201ENST00000330687 Q8N6K4 173 aa15.23■□□□□ 0.03
CMTM4-201ENST00000330687 EBI3Q14213 229 aa15.23■□□□□ 0.03
CMTM4-201ENST00000330687 LITAFQ99732 161 aa15.23■□□□□ 0.03
CMTM4-201ENST00000330687 Q9UF83 564 aa15.22■□□□□ 0.03
CMTM4-201ENST00000330687 BRD3OSQ6XYD6 125 aa15.22■□□□□ 0.03
CMTM4-201ENST00000330687 IGHV1-58A0A0C4DH39 117 aa15.21■□□□□ 0.03
CMTM4-201ENST00000330687 KIR2DL5BQ8NHK3 375 aa15.21■□□□□ 0.03
CMTM4-201ENST00000330687 IGHV1-69P01742 117 aa15.21■□□□□ 0.03
CMTM4-201ENST00000330687 LINC00643Q86TS7 51 aa15.21■□□□□ 0.02
CMTM4-201ENST00000330687 DSCR8Q96T75 97 aa15.2■□□□□ 0.02
CMTM4-201ENST00000330687 FAM240AA0A1B0GVK7 77 aa15.2■□□□□ 0.02
CMTM4-201ENST00000330687 CIRBPQ14011 172 aaKnown RBP15.2■□□□□ 0.02
CMTM4-201ENST00000330687 Q8N2B8 174 aa15.19■□□□□ 0.02
CMTM4-201ENST00000330687 Q9H8V8 135 aa15.19■□□□□ 0.02
CMTM4-201ENST00000330687 A0A087WVE0 104 aa15.19■□□□□ 0.02
CMTM4-201ENST00000330687 A0A1B0GX51 115 aa15.19■□□□□ 0.02
CMTM4-201ENST00000330687 IGHV3-16A0A0C4DH30 117 aa15.18■□□□□ 0.02
CMTM4-201ENST00000330687 CDKN2A-AS1Q9UH64 79 aa15.18■□□□□ 0.02
CMTM4-201ENST00000330687 U3KQE9 123 aa15.18■□□□□ 0.02
CMTM4-201ENST00000330687 PLA2G2CQ5R387 149 aa15.18■□□□□ 0.02
CMTM4-201ENST00000330687 VSIG2Q96IQ7 327 aa15.17■□□□□ 0.02
CMTM4-201ENST00000330687 TIRAPP58753 221 aa15.17■□□□□ 0.02
CMTM4-201ENST00000330687 ZFHX3Q15911 3703 aa15.17■□□□□ 0.02
CMTM4-201ENST00000330687 LINC00526Q96FQ7 95 aa15.17■□□□□ 0.02
CMTM4-201ENST00000330687 CYSTM1Q9H1C7 97 aa15.16■□□□□ 0.02
CMTM4-201ENST00000330687 TRACP01848 142 aa15.16■□□□□ 0.02
CMTM4-201ENST00000330687 MED14OSP0DP75 135 aa15.16■□□□□ 0.02
CMTM4-201ENST00000330687 OR13C6PQ8NH95 151 aa15.16■□□□□ 0.02
CMTM4-201ENST00000330687 DNAL4O96015 105 aa15.15■□□□□ 0.02
CMTM4-201ENST00000330687 MINOS1-NBL1R4GNA1 71 aa15.15■□□□□ 0.02
CMTM4-201ENST00000330687 RNF152Q8N8N0 203 aa15.15■□□□□ 0.02
CMTM4-201ENST00000330687 PEMTQ9UBM1 199 aa15.15■□□□□ 0.02
CMTM4-201ENST00000330687 CCL21O00585 134 aa15.15■□□□□ 0.02
CMTM4-201ENST00000330687 COX7CP15954 63 aa15.15■□□□□ 0.02
CMTM4-201ENST00000330687 HIST1H4AP62805 103 aaKnown RBP15.15■□□□□ 0.02
CMTM4-201ENST00000330687 CITED2Q99967 270 aaPredicted RBP15.14■□□□□ 0.01
CMTM4-201ENST00000330687 SETD2Q9BYW2 2564 aaPredicted RBP15.13■□□□□ 0.01
CMTM4-201ENST00000330687 ACYP1P07311 99 aa15.13■□□□□ 0.01
CMTM4-201ENST00000330687 IGFL3Q6UXB1 125 aa15.13■□□□□ 0.01
CMTM4-201ENST00000330687 C14orf132Q9NPU4 83 aa15.13■□□□□ 0.01
CMTM4-201ENST00000330687 ZNF292O60281 2723 aa15.13■□□□□ 0.01
CMTM4-201ENST00000330687 PIK3CD-AS1Q5SR53 167 aa15.13■□□□□ 0.01
CMTM4-201ENST00000330687 PRIMA1Q86XR5 153 aa15.13■□□□□ 0.01
CMTM4-201ENST00000330687 IGKV3OR2-268A0A0C4DH90 116 aa15.12■□□□□ 0.01
CMTM4-201ENST00000330687 SOCS3O14543 225 aa15.12■□□□□ 0.01
CMTM4-201ENST00000330687 MYO9AB2RTY4 2548 aa15.12■□□□□ 0.01
CMTM4-201ENST00000330687 A0A0J9YX75 114 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 TRBV6-5A0A0K0K1A5 114 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 TINCRA0A1B0GVN0 87 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 HRCT1Q6UXD1 115 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 SPANXDQ9BXN6 97 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 SPANXCQ9NY87 97 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 COX7A2LO14548 114 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 LINC00308Q8TCZ7 52 aa15.11■□□□□ 0.01
CMTM4-201ENST00000330687 IGHV1OR15-1A0A075B7D0 117 aa15.1■□□□□ 0.01
CMTM4-201ENST00000330687 NDUFA4O00483 81 aa15.1■□□□□ 0.01
CMTM4-201ENST00000330687 IMUPQ9GZP8 106 aa15.1■□□□□ 0.01
CMTM4-201ENST00000330687 HRNRQ86YZ3 2850 aaPredicted RBP15.1■□□□□ 0.01
CMTM4-201ENST00000330687 C5orf56Q8N8D9 126 aa15.1■□□□□ 0.01
CMTM4-201ENST00000330687 KLLNB2CW77 178 aa15.09■□□□□ 0.01
CMTM4-201ENST00000330687 MRPS36P82909 103 aaKnown RBP15.09■□□□□ 0.01
CMTM4-201ENST00000330687 DCANP1Q8TF63 244 aa15.09■□□□□ 0.01
CMTM4-201ENST00000330687 FAM218AQ96MZ4 157 aa15.09■□□□□ 0.01
CMTM4-201ENST00000330687 C4orf26Q17RF5 130 aa15.08■□□□□ 0.01
CMTM4-201ENST00000330687 TOMM7Q9P0U1 55 aa15.08■□□□□ 0.01
CMTM4-201ENST00000330687 CACNA1AO00555 2505 aa15.08■□□□□ 0.01
CMTM4-201ENST00000330687 ATP5G1P05496 136 aa15.08■□□□□ 0
CMTM4-201ENST00000330687 LINC00467Q9BRT7 94 aa15.07■□□□□ 0
CMTM4-201ENST00000330687 SONP18583 2426 aaKnown RBP15.07■□□□□ 0
CMTM4-201ENST00000330687 BLCAPP62952 87 aa15.07■□□□□ 0
CMTM4-201ENST00000330687 LRRC75A-AS1Q8N1F1 130 aa15.06■□□□□ 0
CMTM4-201ENST00000330687 RNASE1P07998 156 aaKnown RBP15.06■□□□□ 0
CMTM4-201ENST00000330687 ATOX1O00244 68 aa15.05■□□□□ -0
CMTM4-201ENST00000330687 PRO3102Q9H379 93 aa15.05■□□□□ -0
CMTM4-201ENST00000330687 FAM223BA6NKX1 122 aa15.05■□□□□ -0
CMTM4-201ENST00000330687 DEFB121Q5J5C9 76 aa15.05■□□□□ -0
CMTM4-201ENST00000330687 FAM223AQ8IWN6 122 aa15.05■□□□□ -0
CMTM4-201ENST00000330687 USP9YO00507 2555 aaPredicted RBP15.05■□□□□ -0
CMTM4-201ENST00000330687 SIRPDQ9H106 197 aa15.04■□□□□ -0
CMTM4-201ENST00000330687 COX6A2Q02221 97 aa15.04■□□□□ -0
CMTM4-201ENST00000330687 WFDC9Q8NEX5 89 aa15.04■□□□□ -0
CMTM4-201ENST00000330687 C10orf105Q8TEF2 133 aa15.04■□□□□ -0
CMTM4-201ENST00000330687 MOB4Q9Y3A3 225 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms