RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 Q6ZNX1 250 aa8.78□□□□□ -1
GTF3C6-201ENST00000329970 LYPD6BQ8NI32 183 aa8.78□□□□□ -1
GTF3C6-201ENST00000329970 OCC1Q8TAD7 63 aa8.78□□□□□ -1
GTF3C6-201ENST00000329970 NDUFS6O75380 124 aaKnown RBP8.77□□□□□ -1.01
GTF3C6-201ENST00000329970 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
GTF3C6-201ENST00000329970 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 BLOC1S1P78537 153 aa8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 COTL1Q14019 142 aa8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 TWIST1Q15672 202 aa8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
GTF3C6-201ENST00000329970 J3QL48 77 aa8.75□□□□□ -1.01
GTF3C6-201ENST00000329970 NCR2O95944 276 aa8.75□□□□□ -1.01
GTF3C6-201ENST00000329970 TEX261Q6UWH6 196 aa8.75□□□□□ -1.01
GTF3C6-201ENST00000329970 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
GTF3C6-201ENST00000329970 LRP1Q07954 4544 aaKnown RBP8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 UBE2L6O14933 153 aa8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 AMTP48728 403 aa8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 FOXA3P55318 350 aaPredicted RBP8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 CT83Q5H943 113 aa8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 AKAP14Q86UN6 197 aa8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 GTSF1Q8WW33 167 aa8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
GTF3C6-201ENST00000329970 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
GTF3C6-201ENST00000329970 H7C423 109 aa8.73□□□□□ -1.01
GTF3C6-201ENST00000329970 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
GTF3C6-201ENST00000329970 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
GTF3C6-201ENST00000329970 FAM210AQ96ND0 272 aa8.73□□□□□ -1.01
GTF3C6-201ENST00000329970 IGLV10-54A0A075B6I4 117 aa8.72□□□□□ -1.01
GTF3C6-201ENST00000329970 A8MWL6 223 aa8.72□□□□□ -1.01
GTF3C6-201ENST00000329970 OXTP01178 125 aa8.72□□□□□ -1.01
GTF3C6-201ENST00000329970 ALKAL2Q6UX46 152 aa8.72□□□□□ -1.01
GTF3C6-201ENST00000329970 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
GTF3C6-201ENST00000329970 TRAV26-2A0A0B4J265 109 aa8.71□□□□□ -1.02
GTF3C6-201ENST00000329970 GATCO43716 136 aaKnown RBP8.71□□□□□ -1.02
GTF3C6-201ENST00000329970 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
GTF3C6-201ENST00000329970 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
GTF3C6-201ENST00000329970 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
GTF3C6-201ENST00000329970 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
GTF3C6-201ENST00000329970 AP5S1Q9NUS5 200 aa8.7□□□□□ -1.02
GTF3C6-201ENST00000329970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.7□□□□□ -1.02
GTF3C6-201ENST00000329970 SDHAF1A6NFY7 115 aa8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 APCSP02743 223 aa8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 ZNF25P17030 456 aaPredicted RBP8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 RPL37AP61513 92 aaKnown RBP8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 RPL39LQ96EH5 51 aaKnown RBP8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
GTF3C6-201ENST00000329970 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
GTF3C6-201ENST00000329970 PANO1I0J062 215 aa8.68□□□□□ -1.02
GTF3C6-201ENST00000329970 SLPIP03973 132 aa8.68□□□□□ -1.02
GTF3C6-201ENST00000329970 C15orf56Q8N910 161 aa8.68□□□□□ -1.02
GTF3C6-201ENST00000329970 I3L3M4 83 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 AMMECR1LQ6DCA0 310 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 LINC01551Q86U37 167 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 BORCS7Q96B45 105 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 TMEM191AQ9H0A3 160 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 OSTCQ9NRP0 149 aa8.67□□□□□ -1.02
GTF3C6-201ENST00000329970 A0A1B0GUT8 65 aa8.66□□□□□ -1.02
GTF3C6-201ENST00000329970 GAGE12HA6NDE8 117 aa8.66□□□□□ -1.02
GTF3C6-201ENST00000329970 FGF6P10767 208 aa8.66□□□□□ -1.02
GTF3C6-201ENST00000329970 ESDP10768 282 aa8.66□□□□□ -1.02
GTF3C6-201ENST00000329970 EIF5A2Q9GZV4 153 aaKnown RBP8.66□□□□□ -1.02
GTF3C6-201ENST00000329970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
GTF3C6-201ENST00000329970 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
GTF3C6-201ENST00000329970 HIGD1CA8MV81 97 aa8.65□□□□□ -1.02
GTF3C6-201ENST00000329970 OR5A1Q8NGJ0 315 aa8.65□□□□□ -1.02
GTF3C6-201ENST00000329970 SPACA4Q8TDM5 124 aa8.65□□□□□ -1.02
GTF3C6-201ENST00000329970 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.02
GTF3C6-201ENST00000329970 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 PMCHP20382 165 aa8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
GTF3C6-201ENST00000329970 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 TSHBP01222 138 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 RAB4AP20338 218 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 RPS10P46783 165 aaKnown RBP8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 CEBPGP53567 150 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 MRPL52Q86TS9 123 aaKnown RBP8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 BTF3L4Q96K17 158 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
GTF3C6-201ENST00000329970 A0A087WYN8 130 aa8.62□□□□□ -1.03
GTF3C6-201ENST00000329970 IGKV3OR2-268A0A0C4DH90 116 aa8.62□□□□□ -1.03
GTF3C6-201ENST00000329970 HNRNPA3P51991 378 aaKnown RBP8.62□□□□□ -1.03
GTF3C6-201ENST00000329970 FOXI1Q12951 378 aa8.62□□□□□ -1.03
GTF3C6-201ENST00000329970 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
GTF3C6-201ENST00000329970 V9GYV3 84 aa8.62□□□□□ -1.03
GTF3C6-201ENST00000329970 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
GTF3C6-201ENST00000329970 GAS8-AS1O95177 125 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms