RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 KRTAP24-1Q3LI83 254 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 SLURP1P55000 103 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 SCGB3A1Q96QR1 104 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 TSPEAR-AS2P59090 65 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 C10orf126Q8N4M7 172 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 LINC01587Q99440 93 aa7.72□□□□□ -1.17
ABCF1-201ENST00000326195 FAM223BA6NKX1 122 aa7.71□□□□□ -1.17
ABCF1-201ENST00000326195 IGHV3-30P01768 117 aa7.71□□□□□ -1.17
ABCF1-201ENST00000326195 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.17
ABCF1-201ENST00000326195 FAM223AQ8IWN6 122 aa7.71□□□□□ -1.17
ABCF1-201ENST00000326195 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.17
ABCF1-201ENST00000326195 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 COX8CQ7Z4L0 72 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 BAALCQ8WXS3 180 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 RBAKDNA6NC62 111 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 OVOL1O14753 267 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 HTN1P15515 57 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 ZFAND3Q9H8U3 227 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 MDFICQ9P1T7 246 aa7.71□□□□□ -1.18
ABCF1-201ENST00000326195 RNASE1P07998 156 aaKnown RBP7.7□□□□□ -1.18
ABCF1-201ENST00000326195 LINC00694P0DN24 101 aa7.7□□□□□ -1.18
ABCF1-201ENST00000326195 FAM74A4Q5TZK3 123 aa7.7□□□□□ -1.18
ABCF1-201ENST00000326195 UNQ9165/PRO28630Q6UXU0 137 aa7.7□□□□□ -1.18
ABCF1-201ENST00000326195 RHPN1-AS1Q9BWJ2 59 aa7.7□□□□□ -1.18
ABCF1-201ENST00000326195 PRO1854Q9UHT4 67 aa7.7□□□□□ -1.18
ABCF1-201ENST00000326195 PF4P02776 101 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 CRYGDP07320 174 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 DEFB1P60022 68 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 IGHV4OR15-8A0A075B7B6 117 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 A0A087WW49 117 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 F6UB75 175 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 Q6Q795 121 aa7.69□□□□□ -1.18
ABCF1-201ENST00000326195 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
ABCF1-201ENST00000326195 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
ABCF1-201ENST00000326195 CLPSL1A2RUU4 121 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 C11orf86A6NJI1 115 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 USMG5Q96IX5 58 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 TRAV8-4A0A0B4J246 113 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 IGHV7-4-1A0A0J9YVY3 117 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 ORMDL2Q53FV1 153 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 A4D1N5 150 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 LYRM7Q5U5X0 104 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 CEMP1Q6PRD7 247 aaPredicted RBP7.68□□□□□ -1.18
ABCF1-201ENST00000326195 MDFIQ99750 246 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 DPH3P1Q9H4G8 78 aa7.68□□□□□ -1.18
ABCF1-201ENST00000326195 NDUFA4O00483 81 aa7.67□□□□□ -1.18
ABCF1-201ENST00000326195 KRTAP10-3P60369 221 aa7.67□□□□□ -1.18
ABCF1-201ENST00000326195 MRPL53Q96EL3 112 aaKnown RBP7.67□□□□□ -1.18
ABCF1-201ENST00000326195 SMIM2Q9BVW6 85 aa7.67□□□□□ -1.18
ABCF1-201ENST00000326195 KLK5Q9Y337 293 aaPredicted RBP7.67□□□□□ -1.18
ABCF1-201ENST00000326195 IGHV3-33P01772 117 aa7.67□□□□□ -1.18
ABCF1-201ENST00000326195 SPATA3Q8NHX4 192 aa7.67□□□□□ -1.18
ABCF1-201ENST00000326195 IGLV4-69A0A075B6H9 119 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 TRAV2A0A0B4J234 112 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 TSHBP01222 138 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 ZNF56Q15929 161 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
ABCF1-201ENST00000326195 C2orf66Q6UXQ4 117 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
ABCF1-201ENST00000326195 IGF1P05019 195 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
ABCF1-201ENST00000326195 C9orf47Q6ZRZ4 202 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 SLC25A29Q8N8R3 303 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 DAZ1Q9NQZ3 744 aaKnown RBP7.66□□□□□ -1.18
ABCF1-201ENST00000326195 DUSP14O95147 198 aaKnown RBP7.66□□□□□ -1.18
ABCF1-201ENST00000326195 HOXD3P31249 432 aaPredicted RBP7.66□□□□□ -1.18
ABCF1-201ENST00000326195 AMELXQ99217 191 aa7.66□□□□□ -1.18
ABCF1-201ENST00000326195 TRAV12-3A0A0B4J271 114 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 PPP1R17O96001 155 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.18
ABCF1-201ENST00000326195 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 TMEM263Q8WUH6 116 aaKnown RBP7.65□□□□□ -1.18
ABCF1-201ENST00000326195 LGALS9O00182 355 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 GNRH2O43555 120 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
ABCF1-201ENST00000326195 PSMB8P28062 276 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 HERVK_113P61574 105 aa7.65□□□□□ -1.18
ABCF1-201ENST00000326195 ZNF256Q9Y2P7 627 aaPredicted RBP7.65□□□□□ -1.19
ABCF1-201ENST00000326195 CCL24O00175 119 aa7.64□□□□□ -1.19
ABCF1-201ENST00000326195 LENEPQ9Y5L5 61 aa7.64□□□□□ -1.19
ABCF1-201ENST00000326195 A0A087WWL8 130 aa7.64□□□□□ -1.19
ABCF1-201ENST00000326195 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
ABCF1-201ENST00000326195 PROK1P58294 105 aa7.63□□□□□ -1.19
ABCF1-201ENST00000326195 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
ABCF1-201ENST00000326195 ZNRF2Q8NHG8 242 aa7.63□□□□□ -1.19
ABCF1-201ENST00000326195 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
ABCF1-201ENST00000326195 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
ABCF1-201ENST00000326195 TRGV11A0A075B6L2 103 aa7.62□□□□□ -1.19
ABCF1-201ENST00000326195 C20orf173Q96LM9 149 aa7.62□□□□□ -1.19
ABCF1-201ENST00000326195 TMEM126AQ9H061 195 aa7.62□□□□□ -1.19
ABCF1-201ENST00000326195 IGHV3-64A0A075B6Q5 118 aa7.62□□□□□ -1.19
ABCF1-201ENST00000326195 H3BMM0 161 aa7.62□□□□□ -1.19
ABCF1-201ENST00000326195 IGLV1-40P01703 118 aa7.62□□□□□ -1.19
ABCF1-201ENST00000326195 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
ABCF1-201ENST00000326195 DYNLRB2Q8TF09 96 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms