RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 NUDT10Q8NFP7 164 aa7.9□□□□□ -1.14
TPM3-204ENST00000323144 RPL39LQ96EH5 51 aaKnown RBP7.9□□□□□ -1.14
TPM3-204ENST00000323144 NUDT11Q96G61 164 aa7.9□□□□□ -1.14
TPM3-204ENST00000323144 RPP21Q9H633 154 aaKnown RBP7.9□□□□□ -1.14
TPM3-204ENST00000323144 XKRY2A2RUG3 117 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 F2Z2F3 143 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 TEX46H3BTG2 121 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 SLPIP03973 132 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 CNBPP62633 177 aaKnown RBP7.89□□□□□ -1.15
TPM3-204ENST00000323144 DGAT2L7PQ6IED9 249 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 EIF5AL1Q6IS14 154 aaKnown RBP7.89□□□□□ -1.15
TPM3-204ENST00000323144 Q6ZNX1 250 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 SDIM1Q6ZPB5 146 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 GATD1Q8NB37 220 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 CNFNQ9BYD5 112 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 NIT2Q9NQR4 276 aa7.89□□□□□ -1.15
TPM3-204ENST00000323144 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
TPM3-204ENST00000323144 UBE2L6O14933 153 aa7.88□□□□□ -1.15
TPM3-204ENST00000323144 FOXA3P55318 350 aaPredicted RBP7.88□□□□□ -1.15
TPM3-204ENST00000323144 CIRBPQ14011 172 aaKnown RBP7.88□□□□□ -1.15
TPM3-204ENST00000323144 COTL1Q14019 142 aa7.88□□□□□ -1.15
TPM3-204ENST00000323144 TWIST1Q15672 202 aa7.88□□□□□ -1.15
TPM3-204ENST00000323144 GTSF1Q8WW33 167 aa7.88□□□□□ -1.15
TPM3-204ENST00000323144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.87□□□□□ -1.15
TPM3-204ENST00000323144 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
TPM3-204ENST00000323144 IGKV2-29A2NJV5 120 aaPredicted RBP7.87□□□□□ -1.15
TPM3-204ENST00000323144 OXTP01178 125 aa7.87□□□□□ -1.15
TPM3-204ENST00000323144 SLC51BQ86UW2 128 aa7.87□□□□□ -1.15
TPM3-204ENST00000323144 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
TPM3-204ENST00000323144 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
TPM3-204ENST00000323144 TRAV8-4A0A0B4J246 113 aa7.86□□□□□ -1.15
TPM3-204ENST00000323144 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
TPM3-204ENST00000323144 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
TPM3-204ENST00000323144 WDR73Q6P4I2 378 aa7.86□□□□□ -1.15
TPM3-204ENST00000323144 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
TPM3-204ENST00000323144 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
TPM3-204ENST00000323144 GAS8-AS1O95177 125 aa7.85□□□□□ -1.15
TPM3-204ENST00000323144 ALKAL2Q6UX46 152 aa7.85□□□□□ -1.15
TPM3-204ENST00000323144 CLRN3Q8NCR9 226 aa7.85□□□□□ -1.15
TPM3-204ENST00000323144 OCC1Q8TAD7 63 aa7.85□□□□□ -1.15
TPM3-204ENST00000323144 A0A087WYN8 130 aa7.84□□□□□ -1.15
TPM3-204ENST00000323144 APCSP02743 223 aa7.84□□□□□ -1.15
TPM3-204ENST00000323144 MT1HL1P0DM35 61 aa7.84□□□□□ -1.15
TPM3-204ENST00000323144 hCG_2014768A0A024R1R8 64 aa7.83□□□□□ -1.16
TPM3-204ENST00000323144 CEBPGP53567 150 aa7.83□□□□□ -1.16
TPM3-204ENST00000323144 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
TPM3-204ENST00000323144 SDHAF1A6NFY7 115 aa7.82□□□□□ -1.16
TPM3-204ENST00000323144 FGF6P10767 208 aa7.82□□□□□ -1.16
TPM3-204ENST00000323144 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
TPM3-204ENST00000323144 AMMECR1LQ6DCA0 310 aa7.82□□□□□ -1.16
TPM3-204ENST00000323144 RNASEKQ6P5S7 137 aaKnown RBP7.82□□□□□ -1.16
TPM3-204ENST00000323144 CHCHD10Q8WYQ3 142 aaPredicted RBP7.82□□□□□ -1.16
TPM3-204ENST00000323144 TMEM242Q9NWH2 141 aa7.82□□□□□ -1.16
TPM3-204ENST00000323144 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.81□□□□□ -1.16
TPM3-204ENST00000323144 IGKV2-24A0A0C4DH68 120 aa7.81□□□□□ -1.16
TPM3-204ENST00000323144 PHOX2AO14813 284 aa7.81□□□□□ -1.16
TPM3-204ENST00000323144 GATCO43716 136 aaKnown RBP7.81□□□□□ -1.16
TPM3-204ENST00000323144 TSHBP01222 138 aa7.81□□□□□ -1.16
TPM3-204ENST00000323144 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
TPM3-204ENST00000323144 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
TPM3-204ENST00000323144 GVQW2A0A096LPI5 108 aaPredicted RBP7.8□□□□□ -1.16
TPM3-204ENST00000323144 TMEM250H0YL14 139 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 NCR2O95944 276 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 RPS10P46783 165 aaKnown RBP7.8□□□□□ -1.16
TPM3-204ENST00000323144 COX6A2Q02221 97 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 FOXI1Q12951 378 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 FAM231DQ6ZW35 169 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 AKAP14Q86UN6 197 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
TPM3-204ENST00000323144 A0A096LNI7 61 aa7.79□□□□□ -1.16
TPM3-204ENST00000323144 FAM231BA6NCW3 169 aa7.79□□□□□ -1.16
TPM3-204ENST00000323144 SMIM15Q7Z3B0 74 aa7.79□□□□□ -1.16
TPM3-204ENST00000323144 PRSS3P2Q8NHM4 247 aa7.79□□□□□ -1.16
TPM3-204ENST00000323144 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
TPM3-204ENST00000323144 RNF185Q96GF1 192 aa7.79□□□□□ -1.16
TPM3-204ENST00000323144 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
TPM3-204ENST00000323144 XCL1P47992 114 aa7.78□□□□□ -1.16
TPM3-204ENST00000323144 CT83Q5H943 113 aa7.78□□□□□ -1.16
TPM3-204ENST00000323144 LINC01551Q86U37 167 aa7.78□□□□□ -1.16
TPM3-204ENST00000323144 LYPD6BQ8NI32 183 aa7.78□□□□□ -1.16
TPM3-204ENST00000323144 SMIM7Q9BQ49 75 aa7.78□□□□□ -1.16
TPM3-204ENST00000323144 HIGD1CA8MV81 97 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 A8MWL6 223 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 SMKR1H3BMG3 65 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 I3L3M4 83 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 CCL25O15444 150 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 ESDP10768 282 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 ZNF25P17030 456 aaPredicted RBP7.77□□□□□ -1.17
TPM3-204ENST00000323144 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
TPM3-204ENST00000323144 MAJINQ3KP22 176 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 OR5A1Q8NGJ0 315 aa7.77□□□□□ -1.17
TPM3-204ENST00000323144 H7C423 109 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 NDUFS6O75380 124 aaKnown RBP7.76□□□□□ -1.17
TPM3-204ENST00000323144 PMCHP20382 165 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 BLOC1S1P78537 153 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 CFAP161Q6P656 301 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 Q6ZRU5 148 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 AMN1Q8IY45 258 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 MRAP2Q96G30 205 aa7.76□□□□□ -1.17
TPM3-204ENST00000323144 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms