RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 PAGE4O60829 102 aa12.03□□□□□ -0.48
SSNA1-201ENST00000322310 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
SSNA1-201ENST00000322310 ALG5Q9Y673 324 aa12.03□□□□□ -0.48
SSNA1-201ENST00000322310 COTL1Q14019 142 aa12.01□□□□□ -0.49
SSNA1-201ENST00000322310 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
SSNA1-201ENST00000322310 S100A9P06702 114 aaKnown RBP12□□□□□ -0.49
SSNA1-201ENST00000322310 FOXI1Q12951 378 aa12□□□□□ -0.49
SSNA1-201ENST00000322310 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
SSNA1-201ENST00000322310 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
SSNA1-201ENST00000322310 DEFA1P59665 94 aa11.98□□□□□ -0.49
SSNA1-201ENST00000322310 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
SSNA1-201ENST00000322310 FXYD6-FXYD2A0A087WZ82 144 aa11.97□□□□□ -0.49
SSNA1-201ENST00000322310 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
SSNA1-201ENST00000322310 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
SSNA1-201ENST00000322310 A0A1B0GV50 99 aa11.96□□□□□ -0.49
SSNA1-201ENST00000322310 XCL1P47992 114 aa11.96□□□□□ -0.49
SSNA1-201ENST00000322310 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
SSNA1-201ENST00000322310 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.49
SSNA1-201ENST00000322310 PRR26Q8N8Z3 221 aa11.96□□□□□ -0.49
SSNA1-201ENST00000322310 PSORS1C2Q9UIG4 136 aa11.96□□□□□ -0.49
SSNA1-201ENST00000322310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.95□□□□□ -0.5
SSNA1-201ENST00000322310 IGKV2-29A2NJV5 120 aaPredicted RBP11.95□□□□□ -0.5
SSNA1-201ENST00000322310 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
SSNA1-201ENST00000322310 A0A1W2PNN7 141 aa11.94□□□□□ -0.5
SSNA1-201ENST00000322310 CACNG7P62955 275 aa11.94□□□□□ -0.5
SSNA1-201ENST00000322310 Q6ZNX1 250 aa11.94□□□□□ -0.5
SSNA1-201ENST00000322310 TMUB2Q71RG4 321 aa11.94□□□□□ -0.5
SSNA1-201ENST00000322310 OR2D3Q8NGH3 330 aa11.94□□□□□ -0.5
SSNA1-201ENST00000322310 MED28Q9H204 178 aa11.94□□□□□ -0.5
SSNA1-201ENST00000322310 TRAV26-2A0A0B4J265 109 aa11.93□□□□□ -0.5
SSNA1-201ENST00000322310 IGHV1-58A0A0C4DH39 117 aa11.93□□□□□ -0.5
SSNA1-201ENST00000322310 PFDN1O60925 122 aa11.93□□□□□ -0.5
SSNA1-201ENST00000322310 NTF3P20783 257 aa11.93□□□□□ -0.5
SSNA1-201ENST00000322310 GAGE2BQ13066 116 aa11.93□□□□□ -0.5
SSNA1-201ENST00000322310 KRTAP9-6A0A140TA67 174 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 CCL25O15444 150 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 MT-ND6P03923 174 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 TRGC1P0CF51 173 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 FGF6P10767 208 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 RPL35P42766 123 aaKnown RBP11.92□□□□□ -0.5
SSNA1-201ENST00000322310 SYCNQ0VAF6 134 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 SFT2D1Q8WV19 159 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 CYTL1Q9NRR1 136 aa11.92□□□□□ -0.5
SSNA1-201ENST00000322310 GIPP09681 153 aaPredicted RBP11.91□□□□□ -0.5
SSNA1-201ENST00000322310 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
SSNA1-201ENST00000322310 C1orf137Q5JT78 98 aa11.9□□□□□ -0.5
SSNA1-201ENST00000322310 LYZL1Q6UWQ5 148 aa11.9□□□□□ -0.5
SSNA1-201ENST00000322310 GATD1Q8NB37 220 aa11.9□□□□□ -0.5
SSNA1-201ENST00000322310 OR5A1Q8NGJ0 315 aa11.9□□□□□ -0.5
SSNA1-201ENST00000322310 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
SSNA1-201ENST00000322310 ZNF561-AS1K7EIQ3 104 aa11.89□□□□□ -0.51
SSNA1-201ENST00000322310 RPS20P60866 119 aaKnown RBP11.89□□□□□ -0.51
SSNA1-201ENST00000322310 FAM213BQ8TBF2 198 aa11.89□□□□□ -0.51
SSNA1-201ENST00000322310 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 F2Z2F3 143 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 BCL2P10415 239 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 PRR4Q16378 134 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 MBD3L1Q8WWY6 194 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
SSNA1-201ENST00000322310 FAT4Q6V0I7 4981 aa11.88□□□□□ -0.51
SSNA1-201ENST00000322310 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
SSNA1-201ENST00000322310 H7C423 109 aa11.87□□□□□ -0.51
SSNA1-201ENST00000322310 APCSP02743 223 aa11.87□□□□□ -0.51
SSNA1-201ENST00000322310 CAMPP49913 170 aa11.87□□□□□ -0.51
SSNA1-201ENST00000322310 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
SSNA1-201ENST00000322310 PHF5AQ7RTV0 110 aaKnown RBP11.87□□□□□ -0.51
SSNA1-201ENST00000322310 KCNRGQ8N5I3 272 aa11.87□□□□□ -0.51
SSNA1-201ENST00000322310 NCR2O95944 276 aa11.86□□□□□ -0.51
SSNA1-201ENST00000322310 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
SSNA1-201ENST00000322310 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
SSNA1-201ENST00000322310 G3V3Q6 166 aa11.84□□□□□ -0.51
SSNA1-201ENST00000322310 ARPC5O15511 151 aa11.84□□□□□ -0.51
SSNA1-201ENST00000322310 IFNA1P01562 189 aa11.84□□□□□ -0.51
SSNA1-201ENST00000322310 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
SSNA1-201ENST00000322310 LCE2AQ5TA79 106 aaPredicted RBP11.84□□□□□ -0.51
SSNA1-201ENST00000322310 XKRY2A2RUG3 117 aa11.83□□□□□ -0.52
SSNA1-201ENST00000322310 IGLV7-43P04211 117 aa11.83□□□□□ -0.52
SSNA1-201ENST00000322310 TWIST1Q15672 202 aa11.83□□□□□ -0.52
SSNA1-201ENST00000322310 TMEM101Q96IK0 257 aa11.83□□□□□ -0.52
SSNA1-201ENST00000322310 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
SSNA1-201ENST00000322310 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 CTRLP40313 264 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 C9orf62Q8N4C0 152 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 C11orf52Q96A22 123 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 ISOC2Q96AB3 205 aa11.82□□□□□ -0.52
SSNA1-201ENST00000322310 SDHAF1A6NFY7 115 aa11.81□□□□□ -0.52
SSNA1-201ENST00000322310 H0Y9J4 135 aa11.81□□□□□ -0.52
SSNA1-201ENST00000322310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.81□□□□□ -0.52
SSNA1-201ENST00000322310 APOMO95445 188 aa11.81□□□□□ -0.52
SSNA1-201ENST00000322310 MEF2BQ02080 365 aaPredicted RBP11.81□□□□□ -0.52
SSNA1-201ENST00000322310 RPL18AQ02543 176 aaKnown RBP11.81□□□□□ -0.52
SSNA1-201ENST00000322310 SS18Q15532 418 aa11.81□□□□□ -0.52
SSNA1-201ENST00000322310 H2AFB1P0C5Y9 115 aa11.79□□□□□ -0.52
SSNA1-201ENST00000322310 FOXA3P55318 350 aaPredicted RBP11.79□□□□□ -0.52
SSNA1-201ENST00000322310 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
SSNA1-201ENST00000322310 CAMK2N2Q96S95 79 aa11.79□□□□□ -0.52
SSNA1-201ENST00000322310 IGLV1-50A0A075B6I6 118 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms