RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 IGHV1-58A0A0C4DH39 117 aa13.17□□□□□ -0.3
PRKCB-202ENST00000321728 BLCAPP62952 87 aa13.17□□□□□ -0.3
PRKCB-202ENST00000321728 MRPS36P82909 103 aaKnown RBP13.17□□□□□ -0.3
PRKCB-202ENST00000321728 MIAQ16674 131 aa13.17□□□□□ -0.3
PRKCB-202ENST00000321728 H3BUA1 57 aa13.16□□□□□ -0.3
PRKCB-202ENST00000321728 SPANXDQ9BXN6 97 aa13.16□□□□□ -0.3
PRKCB-202ENST00000321728 SPANXCQ9NY87 97 aa13.16□□□□□ -0.3
PRKCB-202ENST00000321728 CENPEQ02224 2701 aa13.16□□□□□ -0.3
PRKCB-202ENST00000321728 IGHG2P01859 326 aa13.16□□□□□ -0.3
PRKCB-202ENST00000321728 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
PRKCB-202ENST00000321728 HTN1P15515 57 aa13.15□□□□□ -0.3
PRKCB-202ENST00000321728 KLRB1Q12918 225 aa13.15□□□□□ -0.3
PRKCB-202ENST00000321728 H3BUX3 64 aa13.15□□□□□ -0.31
PRKCB-202ENST00000321728 C19orf84I3L1E1 186 aa13.15□□□□□ -0.31
PRKCB-202ENST00000321728 LST1O00453 97 aa13.15□□□□□ -0.31
PRKCB-202ENST00000321728 ZANQ9Y493 2812 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 FAM104AQ969W3 186 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 VSIG2Q96IQ7 327 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 CHCHD5Q9BSY4 110 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 PYGO1Q9Y3Y4 419 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 BRI3O95415 125 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 SNRPD3P62318 126 aaKnown RBP13.14□□□□□ -0.31
PRKCB-202ENST00000321728 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
PRKCB-202ENST00000321728 TMEM61Q8N0U2 210 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 DAND5Q8N907 189 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 FLNCQ14315 2725 aa13.14□□□□□ -0.31
PRKCB-202ENST00000321728 HERV-K104P63124 156 aa13.13□□□□□ -0.31
PRKCB-202ENST00000321728 PROK1P58294 105 aa13.13□□□□□ -0.31
PRKCB-202ENST00000321728 POLQO75417 2590 aa13.12□□□□□ -0.31
PRKCB-202ENST00000321728 K7EMT4 169 aa13.12□□□□□ -0.31
PRKCB-202ENST00000321728 IGHV4-38-2P0DP08 117 aa13.12□□□□□ -0.31
PRKCB-202ENST00000321728 TMEM95Q3KNT9 176 aa13.12□□□□□ -0.31
PRKCB-202ENST00000321728 YAE1D1Q9NRH1 226 aa13.12□□□□□ -0.31
PRKCB-202ENST00000321728 FAM240AA0A1B0GVK7 77 aa13.12□□□□□ -0.31
PRKCB-202ENST00000321728 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
PRKCB-202ENST00000321728 FAM110AQ9BQ89 295 aa13.11□□□□□ -0.31
PRKCB-202ENST00000321728 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-202ENST00000321728 IGLV1-40P01703 118 aa13.1□□□□□ -0.31
PRKCB-202ENST00000321728 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
PRKCB-202ENST00000321728 C3orf56Q8N813 242 aa13.1□□□□□ -0.31
PRKCB-202ENST00000321728 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
PRKCB-202ENST00000321728 SHISA2Q6UWI4 295 aa13.09□□□□□ -0.31
PRKCB-202ENST00000321728 KNCNA6PVL3 124 aa13.08□□□□□ -0.31
PRKCB-202ENST00000321728 DEFB121Q5J5C9 76 aa13.08□□□□□ -0.31
PRKCB-202ENST00000321728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-202ENST00000321728 IGKV2-29A2NJV5 120 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-202ENST00000321728 A6NDX4 124 aa13.07□□□□□ -0.32
PRKCB-202ENST00000321728 Q9UF83 564 aa13.07□□□□□ -0.32
PRKCB-202ENST00000321728 CFAP46Q8IYW2 2715 aa13.07□□□□□ -0.32
PRKCB-202ENST00000321728 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
PRKCB-202ENST00000321728 TMEM101Q96IK0 257 aa13.07□□□□□ -0.32
PRKCB-202ENST00000321728 DUX5Q96PT3 197 aa13.07□□□□□ -0.32
PRKCB-202ENST00000321728 TRBV7-7A0A0K0K1E9 115 aa13.06□□□□□ -0.32
PRKCB-202ENST00000321728 C10orf99Q6UWK7 81 aa13.06□□□□□ -0.32
PRKCB-202ENST00000321728 K7EQG2 157 aa13.06□□□□□ -0.32
PRKCB-202ENST00000321728 UBE2D4Q9Y2X8 147 aa13.06□□□□□ -0.32
PRKCB-202ENST00000321728 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
PRKCB-202ENST00000321728 FAM236AA0A1B0GUQ0 79 aa13.05□□□□□ -0.32
PRKCB-202ENST00000321728 FAM236BA0A1B0GV22 79 aa13.05□□□□□ -0.32
PRKCB-202ENST00000321728 CDKN2A-AS1Q9UH64 79 aa13.05□□□□□ -0.32
PRKCB-202ENST00000321728 CITED2Q99967 270 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-202ENST00000321728 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
PRKCB-202ENST00000321728 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
PRKCB-202ENST00000321728 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
PRKCB-202ENST00000321728 TIMM17BO60830 172 aa13.03□□□□□ -0.32
PRKCB-202ENST00000321728 PRM2P04554 102 aa13.03□□□□□ -0.32
PRKCB-202ENST00000321728 ZNF625Q96I27 306 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-202ENST00000321728 RBMY1A1P0DJD3 496 aaKnown RBP13.03□□□□□ -0.32
PRKCB-202ENST00000321728 RBMY1CP0DJD4 496 aa13.03□□□□□ -0.32
PRKCB-202ENST00000321728 RBMY1FQ15415 496 aaKnown RBP13.03□□□□□ -0.32
PRKCB-202ENST00000321728 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
PRKCB-202ENST00000321728 CFHR3Q02985 330 aa13.02□□□□□ -0.32
PRKCB-202ENST00000321728 USP9XQ93008 2570 aaPredicted RBP13.02□□□□□ -0.33
PRKCB-202ENST00000321728 Q6ZSN1 163 aa13.02□□□□□ -0.33
PRKCB-202ENST00000321728 NDUFA1O15239 70 aa13.01□□□□□ -0.33
PRKCB-202ENST00000321728 ACYP1P07311 99 aa13.01□□□□□ -0.33
PRKCB-202ENST00000321728 GNLYP22749 145 aa13.01□□□□□ -0.33
PRKCB-202ENST00000321728 SYNJ2BPP57105 145 aa13.01□□□□□ -0.33
PRKCB-202ENST00000321728 EDA2RQ9HAV5 297 aa13.01□□□□□ -0.33
PRKCB-202ENST00000321728 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
PRKCB-202ENST00000321728 LINC00308Q8TCZ7 52 aa13□□□□□ -0.33
PRKCB-202ENST00000321728 Q9H8V8 135 aa13□□□□□ -0.33
PRKCB-202ENST00000321728 MYO18BQ8IUG5 2567 aa13□□□□□ -0.33
PRKCB-202ENST00000321728 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
PRKCB-202ENST00000321728 LINC01587Q99440 93 aa12.99□□□□□ -0.33
PRKCB-202ENST00000321728 COX7A2LO14548 114 aa12.99□□□□□ -0.33
PRKCB-202ENST00000321728 PSMB8P28062 276 aa12.99□□□□□ -0.33
PRKCB-202ENST00000321728 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
PRKCB-202ENST00000321728 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
PRKCB-202ENST00000321728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.98□□□□□ -0.33
PRKCB-202ENST00000321728 NRGNQ92686 78 aa12.98□□□□□ -0.33
PRKCB-202ENST00000321728 NACAE9PAV3 2078 aa12.98□□□□□ -0.33
PRKCB-202ENST00000321728 CFAP161Q6P656 301 aa12.97□□□□□ -0.33
PRKCB-202ENST00000321728 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
PRKCB-202ENST00000321728 IMUPQ9GZP8 106 aa12.97□□□□□ -0.33
PRKCB-202ENST00000321728 AVPP01185 164 aa12.96□□□□□ -0.33
PRKCB-202ENST00000321728 COX6A2Q02221 97 aa12.96□□□□□ -0.33
PRKCB-202ENST00000321728 Q8N2B8 174 aa12.96□□□□□ -0.33
PRKCB-202ENST00000321728 IGHV4-30-2A0A087WSY4 118 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms