RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 GFRA4Q9GZZ7 299 aa6.51□□□□□ -1.37
CCDC65-202ENST00000320516 A0A1B0GUV1 79 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 FAM231BA6NCW3 169 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 HIGD1CA8MV81 97 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 SRSF3P84103 164 aaKnown RBP6.5□□□□□ -1.37
CCDC65-202ENST00000320516 Q6ZSA8 131 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 DEFB104AQ8WTQ1 72 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 RPL39LQ96EH5 51 aaKnown RBP6.5□□□□□ -1.37
CCDC65-202ENST00000320516 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 V9GYV3 84 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
CCDC65-202ENST00000320516 EPM2AB3EWF7 344 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
CCDC65-202ENST00000320516 HAMPP81172 84 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 FAM74A3Q4VXF1 159 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 SMIM15Q7Z3B0 74 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 ISOC2Q96AB3 205 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 IGLV4-60A0A075B6I1 120 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 A0A1B0GUT8 65 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 COTL1Q14019 142 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 TMEM241Q24JQ0 296 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 CLPSL2Q6UWE3 100 aa6.49□□□□□ -1.37
CCDC65-202ENST00000320516 GAS8-AS1O95177 125 aa6.48□□□□□ -1.37
CCDC65-202ENST00000320516 AMTP48728 403 aa6.48□□□□□ -1.37
CCDC65-202ENST00000320516 REG3AQ06141 175 aa6.48□□□□□ -1.37
CCDC65-202ENST00000320516 RNF185Q96GF1 192 aa6.48□□□□□ -1.37
CCDC65-202ENST00000320516 TMEM191AQ9H0A3 160 aa6.48□□□□□ -1.37
CCDC65-202ENST00000320516 SMDT1Q9H4I9 107 aa6.48□□□□□ -1.37
CCDC65-202ENST00000320516 TRBV6-5A0A0K0K1A5 114 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
CCDC65-202ENST00000320516 PEA15Q15121 130 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 LINC01620Q4KN68 170 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 Q5VSD8 79 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 BORCS7Q96B45 105 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 NAT8Q9UHE5 227 aa6.47□□□□□ -1.37
CCDC65-202ENST00000320516 USP17L23D6RBM5 183 aa6.46□□□□□ -1.37
CCDC65-202ENST00000320516 NCR2O95944 276 aa6.46□□□□□ -1.37
CCDC65-202ENST00000320516 HLA-DQA1P01909 254 aa6.46□□□□□ -1.37
CCDC65-202ENST00000320516 C14orf177Q52M58 125 aa6.46□□□□□ -1.37
CCDC65-202ENST00000320516 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
CCDC65-202ENST00000320516 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
CCDC65-202ENST00000320516 UBE2L6O14933 153 aa6.46□□□□□ -1.38
CCDC65-202ENST00000320516 PRSS1P07477 247 aa6.46□□□□□ -1.38
CCDC65-202ENST00000320516 RAB4AP20338 218 aa6.46□□□□□ -1.38
CCDC65-202ENST00000320516 ADIRFQ15847 76 aa6.46□□□□□ -1.38
CCDC65-202ENST00000320516 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
CCDC65-202ENST00000320516 RIGQ13278 110 aa6.45□□□□□ -1.38
CCDC65-202ENST00000320516 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
CCDC65-202ENST00000320516 SMIM27A0A1W2PRY6 76 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 H7C423 109 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 I3L3M4 83 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 POLR2KP53803 58 aaKnown RBP6.44□□□□□ -1.38
CCDC65-202ENST00000320516 MRAP2Q96G30 205 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.44□□□□□ -1.38
CCDC65-202ENST00000320516 IGKV2-29A2NJV5 120 aaPredicted RBP6.44□□□□□ -1.38
CCDC65-202ENST00000320516 TSHBP01222 138 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 APCSP02743 223 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 ESDP10768 282 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 ST20Q9HBF5 79 aa6.44□□□□□ -1.38
CCDC65-202ENST00000320516 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
CCDC65-202ENST00000320516 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
CCDC65-202ENST00000320516 PMCHP20382 165 aa6.43□□□□□ -1.38
CCDC65-202ENST00000320516 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
CCDC65-202ENST00000320516 SCXQ7RTU7 201 aa6.43□□□□□ -1.38
CCDC65-202ENST00000320516 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 FGF6P10767 208 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 NRACQ8N912 160 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 C9orf163Q8N9P6 203 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 CHAC1Q9BUX1 264 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 TMEM242Q9NWH2 141 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
CCDC65-202ENST00000320516 SMKR1H3BMG3 65 aa6.41□□□□□ -1.38
CCDC65-202ENST00000320516 ZNF25P17030 456 aaPredicted RBP6.41□□□□□ -1.38
CCDC65-202ENST00000320516 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
CCDC65-202ENST00000320516 AMMECR1LQ6DCA0 310 aa6.41□□□□□ -1.38
CCDC65-202ENST00000320516 RNASEKQ6P5S7 137 aaKnown RBP6.41□□□□□ -1.38
CCDC65-202ENST00000320516 MRPL51Q4U2R6 128 aaKnown RBP6.41□□□□□ -1.38
CCDC65-202ENST00000320516 CIRBP-AS1Q8TBR5 109 aa6.41□□□□□ -1.38
CCDC65-202ENST00000320516 A0A1B0GW15 77 aa6.4□□□□□ -1.38
CCDC65-202ENST00000320516 A0A1B0GXF2 115 aa6.4□□□□□ -1.38
CCDC65-202ENST00000320516 PPP1R17O96001 155 aa6.4□□□□□ -1.38
CCDC65-202ENST00000320516 SLPIP03973 132 aa6.4□□□□□ -1.38
CCDC65-202ENST00000320516 CAMPP49913 170 aa6.4□□□□□ -1.38
CCDC65-202ENST00000320516 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
CCDC65-202ENST00000320516 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
CCDC65-202ENST00000320516 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 LINC00862A6NCI5 91 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 VCYO14598 125 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 MRPL52Q86TS9 123 aaKnown RBP6.39□□□□□ -1.39
CCDC65-202ENST00000320516 LINC00528Q8N1L1 170 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 OR5A1Q8NGJ0 315 aa6.39□□□□□ -1.39
CCDC65-202ENST00000320516 CHCHD10Q8WYQ3 142 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms