RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 APLNQ9ULZ1 77 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 CELA1Q9UNI1 258 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 COL6A5A8TX70 2615 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 KRTAP23-1A1A580 65 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 GRIFINA4D1Z8 144 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 MRPL51Q4U2R6 128 aaKnown RBP2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 NRACQ8N912 160 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 NEXN-AS1Q8NBZ9 246 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 ATP6V0E2Q8NHE4 81 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 ZNF479Q96JC4 524 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 KIR2DL4Q99706 377 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 SMIM2Q9BVW6 85 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 TENM1Q9UKZ4 2725 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 JMJD1CQ15652 2540 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 J3KRW8 73 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 DNAH10OSP0CZ25 163 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 RAB5AP20339 215 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 CKS2P33552 79 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 SUMO2P61956 95 aaKnown RBP2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 COTL1Q14019 142 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 LINC01556Q5JQF7 62 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 TMEM141Q96I45 108 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 TRBV25-1A0A075B6N4 114 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 COLCA2A8K830 154 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 Q6ZTC4 211 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 SLC25A29Q8N8R3 303 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 VSIG2Q96IQ7 327 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 PRELID3AQ96N28 172 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 TIMM17AQ99595 171 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 RETNQ9HD89 108 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 TRAPPC1Q9Y5R8 145 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 HUWE1Q7Z6Z7 4374 aaKnown RBP2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 TMSB15BA0A087X1C1 80 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 A0A096LPF7 62 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 F5H768 121 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 ATP6V1G1O75348 118 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 SEC11AP67812 179 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 ATRAIDQ6UW56 229 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 C14orf178Q8N769 122 aaPredicted RBP2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 ALKBH7Q9BT30 221 aaPredicted RBP2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 TMEM70Q9BUB7 260 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 FAT3Q8TDW7 4589 aa2.28□□□□□ -2.04
SCAMP1-201ENST00000320280 IGLV2-18A0A075B6J9 118 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 TRAV8-4A0A0B4J246 113 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 TNFRSF6BO95407 300 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 MGPP08493 103 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 GCSHP23434 173 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 FOXI1Q12951 378 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 TMEM88Q6PEY1 159 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 SFTA2Q6UW10 78 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 SLC7A5P1Q8MH63 180 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 TMEM243Q9BU79 118 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 STAB1Q9NY15 2570 aa2.28□□□□□ -2.05
SCAMP1-201ENST00000320280 ATP5LO75964 103 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 DEFB130BP0DP73 79 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 DEFB130AP0DP74 79 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 EVI2AP22794 236 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 NANOS2P60321 138 aaKnown RBP2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 SELENOKQ9Y6D0 94 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 SETD2Q9BYW2 2564 aaPredicted RBP2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 SDHAF1A6NFY7 115 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 C1orf196B1AJZ1 125 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 F5H697 171 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 MRPL54Q6P161 138 aaKnown RBP2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 TPPP3Q9BW30 176 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 TM2D2Q9BX73 214 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 D6R8Y8 96 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 FCER1GP30273 86 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 CASC10Q5T4H9 136 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 TMEM101Q96IK0 257 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 CYSLTR1Q9Y271 337 aa2.27□□□□□ -2.05
SCAMP1-201ENST00000320280 TRAV8-3A0A0A6YYJ7 113 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 TRAV12-1A0A0B4J245 112 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 PRB2P02812 416 aaPredicted RBP2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 HTN1P15515 57 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 CAMPP49913 170 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 SNRPEP62304 92 aaKnown RBP2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 FABP9Q0Z7S8 132 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 MIAQ16674 131 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 C14orf177Q52M58 125 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 FA2HQ7L5A8 372 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 TOMM6Q96B49 74 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 TGIF2-C20orf24A0A0A6YYL0 155 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 UBE2L6O14933 153 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 TSHBP01222 138 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 AMTP48728 403 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 PDZD11Q5EBL8 140 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 FAM74A4Q5TZK3 123 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 Q6ZQT7 251 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 LINC00336Q6ZUF6 198 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 C20orf203Q8NBC4 194 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 C18orf32Q8TCD1 76 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 SAMD10Q9BYL1 202 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 PRR34Q9NV39 138 aa2.26□□□□□ -2.05
SCAMP1-201ENST00000320280 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms