RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 A8MWL6 223 aa11.54□□□□□ -0.56
TPM1-203ENST00000317516 PRSS1P07477 247 aa11.54□□□□□ -0.56
TPM1-203ENST00000317516 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
TPM1-203ENST00000317516 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
TPM1-203ENST00000317516 CIRBP-AS1Q8TBR5 109 aa11.54□□□□□ -0.56
TPM1-203ENST00000317516 CEBPGP53567 150 aa11.53□□□□□ -0.56
TPM1-203ENST00000317516 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
TPM1-203ENST00000317516 FAM231DQ6ZW35 169 aa11.53□□□□□ -0.56
TPM1-203ENST00000317516 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
TPM1-203ENST00000317516 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
TPM1-203ENST00000317516 GTSF1Q8WW33 167 aa11.53□□□□□ -0.56
TPM1-203ENST00000317516 IGLV4-60A0A075B6I1 120 aa11.52□□□□□ -0.57
TPM1-203ENST00000317516 IGLV10-54A0A075B6I4 117 aa11.52□□□□□ -0.57
TPM1-203ENST00000317516 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
TPM1-203ENST00000317516 EIF5A2Q9GZV4 153 aaKnown RBP11.52□□□□□ -0.57
TPM1-203ENST00000317516 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
TPM1-203ENST00000317516 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
TPM1-203ENST00000317516 J3QL48 77 aa11.5□□□□□ -0.57
TPM1-203ENST00000317516 NDUFS6O75380 124 aaKnown RBP11.5□□□□□ -0.57
TPM1-203ENST00000317516 NCR2O95944 276 aa11.5□□□□□ -0.57
TPM1-203ENST00000317516 FOXA3P55318 350 aaPredicted RBP11.5□□□□□ -0.57
TPM1-203ENST00000317516 CT83Q5H943 113 aa11.5□□□□□ -0.57
TPM1-203ENST00000317516 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
TPM1-203ENST00000317516 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
TPM1-203ENST00000317516 AP5S1Q9NUS5 200 aa11.49□□□□□ -0.57
TPM1-203ENST00000317516 hDV102S1A0JD36 115 aa11.48□□□□□ -0.57
TPM1-203ENST00000317516 H7C423 109 aa11.48□□□□□ -0.57
TPM1-203ENST00000317516 VPS13BQ7Z7G8 4022 aa11.48□□□□□ -0.57
TPM1-203ENST00000317516 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
TPM1-203ENST00000317516 CFAP161Q6P656 301 aa11.47□□□□□ -0.57
TPM1-203ENST00000317516 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
TPM1-203ENST00000317516 GFRA4Q9GZZ7 299 aa11.47□□□□□ -0.57
TPM1-203ENST00000317516 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.46□□□□□ -0.57
TPM1-203ENST00000317516 SDHAF1A6NFY7 115 aa11.46□□□□□ -0.57
TPM1-203ENST00000317516 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
TPM1-203ENST00000317516 APCSP02743 223 aa11.46□□□□□ -0.57
TPM1-203ENST00000317516 CNBPP62633 177 aaKnown RBP11.46□□□□□ -0.57
TPM1-203ENST00000317516 LINC01551Q86U37 167 aa11.46□□□□□ -0.57
TPM1-203ENST00000317516 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
TPM1-203ENST00000317516 FAM210AQ96ND0 272 aa11.46□□□□□ -0.57
TPM1-203ENST00000317516 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
TPM1-203ENST00000317516 FAM231BA6NCW3 169 aa11.45□□□□□ -0.58
TPM1-203ENST00000317516 I3L3M4 83 aa11.45□□□□□ -0.58
TPM1-203ENST00000317516 PMCHP20382 165 aa11.45□□□□□ -0.58
TPM1-203ENST00000317516 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
TPM1-203ENST00000317516 SDIM1Q6ZPB5 146 aa11.45□□□□□ -0.58
TPM1-203ENST00000317516 TRBV6-5A0A0K0K1A5 114 aa11.44□□□□□ -0.58
TPM1-203ENST00000317516 OSTCQ9NRP0 149 aa11.44□□□□□ -0.58
TPM1-203ENST00000317516 DNAH8Q96JB1 4490 aa11.44□□□□□ -0.58
TPM1-203ENST00000317516 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
TPM1-203ENST00000317516 HIGD1CA8MV81 97 aa11.43□□□□□ -0.58
TPM1-203ENST00000317516 KRTAP29-1A8MX34 341 aaPredicted RBP11.43□□□□□ -0.58
TPM1-203ENST00000317516 BTF3L4Q96K17 158 aa11.43□□□□□ -0.58
TPM1-203ENST00000317516 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
TPM1-203ENST00000317516 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
TPM1-203ENST00000317516 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
TPM1-203ENST00000317516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.42□□□□□ -0.58
TPM1-203ENST00000317516 IGKV2-29A2NJV5 120 aaPredicted RBP11.42□□□□□ -0.58
TPM1-203ENST00000317516 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
TPM1-203ENST00000317516 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
TPM1-203ENST00000317516 FGF6P10767 208 aa11.42□□□□□ -0.58
TPM1-203ENST00000317516 ZNF25P17030 456 aaPredicted RBP11.42□□□□□ -0.58
TPM1-203ENST00000317516 DPH3Q96FX2 82 aa11.42□□□□□ -0.58
TPM1-203ENST00000317516 TMEM101Q96IK0 257 aa11.42□□□□□ -0.58
TPM1-203ENST00000317516 RPL37AP61513 92 aaKnown RBP11.41□□□□□ -0.58
TPM1-203ENST00000317516 FAM74A3Q4VXF1 159 aa11.41□□□□□ -0.58
TPM1-203ENST00000317516 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
TPM1-203ENST00000317516 RIGQ13278 110 aa11.4□□□□□ -0.58
TPM1-203ENST00000317516 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
TPM1-203ENST00000317516 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
TPM1-203ENST00000317516 MRAP2Q96G30 205 aa11.4□□□□□ -0.58
TPM1-203ENST00000317516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.4□□□□□ -0.58
TPM1-203ENST00000317516 HERC1Q15751 4861 aa11.4□□□□□ -0.58
TPM1-203ENST00000317516 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
TPM1-203ENST00000317516 PPP1R17O96001 155 aa11.38□□□□□ -0.59
TPM1-203ENST00000317516 RAB4AP20338 218 aa11.38□□□□□ -0.59
TPM1-203ENST00000317516 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
TPM1-203ENST00000317516 SLPIP03973 132 aa11.37□□□□□ -0.59
TPM1-203ENST00000317516 ESDP10768 282 aa11.37□□□□□ -0.59
TPM1-203ENST00000317516 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
TPM1-203ENST00000317516 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
TPM1-203ENST00000317516 V9GYV3 84 aa11.37□□□□□ -0.59
TPM1-203ENST00000317516 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 VCYO14598 125 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 OXTP01178 125 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 TSHBP01222 138 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 RPS10P46783 165 aaKnown RBP11.36□□□□□ -0.59
TPM1-203ENST00000317516 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
TPM1-203ENST00000317516 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
TPM1-203ENST00000317516 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 NUP35Q8NFH5 326 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 ISOC2Q96AB3 205 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
TPM1-203ENST00000317516 PANO1I0J062 215 aa11.35□□□□□ -0.59
TPM1-203ENST00000317516 GAS8-AS1O95177 125 aa11.35□□□□□ -0.59
TPM1-203ENST00000317516 PEA15Q15121 130 aa11.35□□□□□ -0.59
TPM1-203ENST00000317516 FCER1GP30273 86 aa11.34□□□□□ -0.59
TPM1-203ENST00000317516 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
TPM1-203ENST00000317516 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms