RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 ITPR2Q14571 2701 aa14.38□□□□□ -0.11
ZNF554-201ENST00000317243 PSMB8P28062 276 aa14.38□□□□□ -0.11
ZNF554-201ENST00000317243 ATXN8Q156A1 80 aa14.38□□□□□ -0.11
ZNF554-201ENST00000317243 C18orf65Q6ZTR6 163 aa14.38□□□□□ -0.11
ZNF554-201ENST00000317243 LINC01356Q8N9X3 169 aa14.38□□□□□ -0.11
ZNF554-201ENST00000317243 ZNF256Q9Y2P7 627 aaPredicted RBP14.38□□□□□ -0.11
ZNF554-201ENST00000317243 MEIG1Q5JSS6 88 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 SUMO4Q6EEV6 95 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 PPP1R17O96001 155 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 HIST2H2BCQ6DN03 193 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 Q6Q795 121 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 ZNF843Q8N446 348 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 MTORP42345 2549 aa14.37□□□□□ -0.11
ZNF554-201ENST00000317243 LINC00315P59091 139 aa14.36□□□□□ -0.11
ZNF554-201ENST00000317243 OPRPNQ99935 248 aaPredicted RBP14.36□□□□□ -0.11
ZNF554-201ENST00000317243 P0DMU3 169 aa14.36□□□□□ -0.11
ZNF554-201ENST00000317243 FAM231AP0DMU4 169 aa14.36□□□□□ -0.11
ZNF554-201ENST00000317243 FAM231CP0DMU5 169 aa14.36□□□□□ -0.11
ZNF554-201ENST00000317243 DEFB136Q30KP8 78 aa14.36□□□□□ -0.11
ZNF554-201ENST00000317243 TRAV12-2A0A075B6T6 113 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 SDHAF1A6NFY7 115 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 KIF25-AS1Q9Y6Z4 181 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 TRAV12-3A0A0B4J271 114 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 BRI3O95415 125 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 SYNJ2BPP57105 145 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 ZNF876PQ49A33 203 aa14.35□□□□□ -0.11
ZNF554-201ENST00000317243 H3BMM0 161 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 H3BUA1 57 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 DCANP1Q8TF63 244 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 UBE2WQ96B02 151 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 FAM19A4Q96LR4 140 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 DUX3Q96PT4 197 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 A0A0B4J2C4 111 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 TRIAP1O43715 76 aa14.34□□□□□ -0.11
ZNF554-201ENST00000317243 POLR2KP53803 58 aaKnown RBP14.34□□□□□ -0.11
ZNF554-201ENST00000317243 TRBV10-2A0A0K0K1G8 114 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 VCYO14598 125 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 RPL13AP40429 203 aaKnown RBP14.33□□□□□ -0.12
ZNF554-201ENST00000317243 CHCHD5Q9BSY4 110 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 ZNF580Q9UK33 172 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 NOTCH3Q9UM47 2321 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 LGALS9O00182 355 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 MED14OSP0DP75 135 aa14.33□□□□□ -0.12
ZNF554-201ENST00000317243 C2orf82Q6UX34 121 aa14.32□□□□□ -0.12
ZNF554-201ENST00000317243 TMEM141Q96I45 108 aa14.32□□□□□ -0.12
ZNF554-201ENST00000317243 IGHV4OR15-8A0A075B7B6 117 aa14.31□□□□□ -0.12
ZNF554-201ENST00000317243 A0A087WW49 117 aa14.31□□□□□ -0.12
ZNF554-201ENST00000317243 IGHV4-31P0DP07 118 aa14.31□□□□□ -0.12
ZNF554-201ENST00000317243 ZNF56Q15929 161 aa14.31□□□□□ -0.12
ZNF554-201ENST00000317243 ADARB2-AS1A8MUL3 147 aa14.31□□□□□ -0.12
ZNF554-201ENST00000317243 TIMM17AQ99595 171 aa14.31□□□□□ -0.12
ZNF554-201ENST00000317243 TMEM223A0PJW6 202 aa14.29□□□□□ -0.12
ZNF554-201ENST00000317243 LEPROTO15243 131 aa14.29□□□□□ -0.12
ZNF554-201ENST00000317243 H7C423 109 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 APRG1Q8IVJ8 170 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.28□□□□□ -0.12
ZNF554-201ENST00000317243 PRM2P04554 102 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 PRSS2P07478 247 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 POM121L12Q8N7R1 296 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 ZNF702PQ9H963 129 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 MDFICQ9P1T7 246 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 JMJD1CQ15652 2540 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 NXPH4O95158 308 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 DSCR9P59020 149 aa14.28□□□□□ -0.12
ZNF554-201ENST00000317243 KLLNB2CW77 178 aa14.27□□□□□ -0.12
ZNF554-201ENST00000317243 Q6ZSV7 163 aa14.27□□□□□ -0.12
ZNF554-201ENST00000317243 HELZ2Q9BYK8 2649 aaKnown RBP14.27□□□□□ -0.13
ZNF554-201ENST00000317243 TRBV30A0A0K0K1B3 111 aa14.27□□□□□ -0.13
ZNF554-201ENST00000317243 Q96MF0 132 aa14.27□□□□□ -0.13
ZNF554-201ENST00000317243 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.13
ZNF554-201ENST00000317243 TNFRSF18Q9Y5U5 241 aa14.26□□□□□ -0.13
ZNF554-201ENST00000317243 SLURP1P55000 103 aa14.26□□□□□ -0.13
ZNF554-201ENST00000317243 SPINK13Q1W4C9 94 aa14.26□□□□□ -0.13
ZNF554-201ENST00000317243 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
ZNF554-201ENST00000317243 ZNF22P17026 224 aaPredicted RBP14.25□□□□□ -0.13
ZNF554-201ENST00000317243 A0A0J9YXV3 536 aa14.25□□□□□ -0.13
ZNF554-201ENST00000317243 A0A0J9YXY3 114 aa14.25□□□□□ -0.13
ZNF554-201ENST00000317243 TRBV27A0A0K0K1C4 114 aa14.25□□□□□ -0.13
ZNF554-201ENST00000317243 HOXD3P31249 432 aaPredicted RBP14.25□□□□□ -0.13
ZNF554-201ENST00000317243 M0R2P5 195 aa14.24□□□□□ -0.13
ZNF554-201ENST00000317243 NPC2P61916 151 aa14.24□□□□□ -0.13
ZNF554-201ENST00000317243 Q6YL49 198 aa14.24□□□□□ -0.13
ZNF554-201ENST00000317243 PPDPFQ9H3Y8 114 aa14.24□□□□□ -0.13
ZNF554-201ENST00000317243 PDZD2O15018 2839 aa14.24□□□□□ -0.13
ZNF554-201ENST00000317243 LINC01600Q96MT4 127 aa14.23□□□□□ -0.13
ZNF554-201ENST00000317243 ICOSQ9Y6W8 199 aa14.23□□□□□ -0.13
ZNF554-201ENST00000317243 K7EMT4 169 aa14.22□□□□□ -0.13
ZNF554-201ENST00000317243 HTN1P15515 57 aa14.22□□□□□ -0.13
ZNF554-201ENST00000317243 ID1P41134 155 aa14.22□□□□□ -0.13
ZNF554-201ENST00000317243 C11orf44Q8N8P7 122 aa14.22□□□□□ -0.13
ZNF554-201ENST00000317243 SPXQ9BT56 116 aa14.22□□□□□ -0.13
ZNF554-201ENST00000317243 SETXQ7Z333 2677 aaKnown RBP14.22□□□□□ -0.13
ZNF554-201ENST00000317243 M0QY20 66 aa14.21□□□□□ -0.13
ZNF554-201ENST00000317243 FSHBP01225 129 aa14.21□□□□□ -0.13
ZNF554-201ENST00000317243 LINC01587Q99440 93 aa14.21□□□□□ -0.13
ZNF554-201ENST00000317243 DEFB113Q30KQ7 82 aa14.21□□□□□ -0.14
ZNF554-201ENST00000317243 KHDC1LQ5JSQ8 128 aa14.21□□□□□ -0.14
ZNF554-201ENST00000317243 ADAMTSL4-AS1Q5T5F5 129 aa14.21□□□□□ -0.14
ZNF554-201ENST00000317243 IGHV3-16A0A0C4DH30 117 aa14.2□□□□□ -0.14
ZNF554-201ENST00000317243 A0A0J9YX75 114 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms