RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 SMR3BP02814 79 aaPredicted RBP10.28□□□□□ -0.76
FOXR1-201ENST00000317011 ZNF56Q15929 161 aa10.28□□□□□ -0.76
FOXR1-201ENST00000317011 SMIM15Q7Z3B0 74 aa10.28□□□□□ -0.76
FOXR1-201ENST00000317011 ATP5L2Q7Z4Y8 100 aa10.28□□□□□ -0.76
FOXR1-201ENST00000317011 FRZBQ92765 325 aa10.28□□□□□ -0.76
FOXR1-201ENST00000317011 TRAV9-1A0A075B6T8 112 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 A0A1B0GW15 77 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 A0A1B0GXF2 115 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 SCO1O75880 301 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
FOXR1-201ENST00000317011 SRRM2Q9UQ35 2752 aaKnown RBP10.27□□□□□ -0.77
FOXR1-201ENST00000317011 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 F5H697 171 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 S100A8P05109 93 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 UBE2D3P61077 147 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 UBE2D2P62837 147 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 ELOBQ15370 118 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 Q6ZSA8 131 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 CHCHD7Q9BUK0 85 aa10.26□□□□□ -0.77
FOXR1-201ENST00000317011 TRBV7-3A0A075B6L6 115 aa10.25□□□□□ -0.77
FOXR1-201ENST00000317011 RAB4BP61018 213 aa10.25□□□□□ -0.77
FOXR1-201ENST00000317011 TMEM191AQ9H0A3 160 aa10.25□□□□□ -0.77
FOXR1-201ENST00000317011 AMN1Q8IY45 258 aa10.24□□□□□ -0.77
FOXR1-201ENST00000317011 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
FOXR1-201ENST00000317011 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
FOXR1-201ENST00000317011 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
FOXR1-201ENST00000317011 SUMO4Q6EEV6 95 aa10.23□□□□□ -0.77
FOXR1-201ENST00000317011 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
FOXR1-201ENST00000317011 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
FOXR1-201ENST00000317011 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
FOXR1-201ENST00000317011 TRAV26-2A0A0B4J265 109 aa10.22□□□□□ -0.77
FOXR1-201ENST00000317011 HAMPP81172 84 aa10.22□□□□□ -0.77
FOXR1-201ENST00000317011 RASL11AQ6T310 242 aa10.22□□□□□ -0.77
FOXR1-201ENST00000317011 GATD1Q8NB37 220 aa10.22□□□□□ -0.77
FOXR1-201ENST00000317011 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
FOXR1-201ENST00000317011 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
FOXR1-201ENST00000317011 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
FOXR1-201ENST00000317011 TRBV24-1A0A075B6N3 115 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 TRBV6-8A0A0A6YYG3 113 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 FAM104BQ5XKR9 115 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 TMEM136Q6ZRR5 245 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 Q8N976 141 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 NEXN-AS1Q8NBZ9 246 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 RMI2Q96E14 147 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 RNF185Q96GF1 192 aa10.21□□□□□ -0.77
FOXR1-201ENST00000317011 LECT2O14960 151 aa10.2□□□□□ -0.78
FOXR1-201ENST00000317011 NCR2O95944 276 aa10.2□□□□□ -0.78
FOXR1-201ENST00000317011 RAB4AP20338 218 aa10.2□□□□□ -0.78
FOXR1-201ENST00000317011 SMKR1H3BMG3 65 aa10.19□□□□□ -0.78
FOXR1-201ENST00000317011 Q0VG73 95 aa10.19□□□□□ -0.78
FOXR1-201ENST00000317011 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
FOXR1-201ENST00000317011 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
FOXR1-201ENST00000317011 A0A087WX48 190 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 H7C1H1 209 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 M0QY20 66 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 HLA-DQA1P01909 254 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 COX19Q49B96 90 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 UBE2WQ96B02 151 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 GNB1LQ9BYB4 327 aa10.18□□□□□ -0.78
FOXR1-201ENST00000317011 IGKV2D-24A0A075B6R9 120 aa10.17□□□□□ -0.78
FOXR1-201ENST00000317011 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
FOXR1-201ENST00000317011 NTM-AS1Q6ZSK4 140 aa10.17□□□□□ -0.78
FOXR1-201ENST00000317011 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
FOXR1-201ENST00000317011 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
FOXR1-201ENST00000317011 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.16□□□□□ -0.78
FOXR1-201ENST00000317011 D6R8Y8 96 aa10.16□□□□□ -0.78
FOXR1-201ENST00000317011 APCSP02743 223 aa10.16□□□□□ -0.78
FOXR1-201ENST00000317011 MT-ND6P03923 174 aa10.16□□□□□ -0.78
FOXR1-201ENST00000317011 CKS2P33552 79 aa10.16□□□□□ -0.78
FOXR1-201ENST00000317011 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
FOXR1-201ENST00000317011 COLCA2A8K830 154 aa10.15□□□□□ -0.78
FOXR1-201ENST00000317011 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
FOXR1-201ENST00000317011 RPS10P46783 165 aaKnown RBP10.15□□□□□ -0.78
FOXR1-201ENST00000317011 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
FOXR1-201ENST00000317011 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.78
FOXR1-201ENST00000317011 FABP9Q0Z7S8 132 aa10.14□□□□□ -0.79
FOXR1-201ENST00000317011 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
FOXR1-201ENST00000317011 TMEM97Q5BJF2 176 aa10.14□□□□□ -0.79
FOXR1-201ENST00000317011 NIT2Q9NQR4 276 aa10.14□□□□□ -0.79
FOXR1-201ENST00000317011 PRR34Q9NV39 138 aa10.14□□□□□ -0.79
FOXR1-201ENST00000317011 RAB5AP20339 215 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 PKIAP61925 76 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 KRTAP26-1Q6PEX3 210 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 NRACQ8N912 160 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 PRELID3AQ96N28 172 aa10.13□□□□□ -0.79
FOXR1-201ENST00000317011 NPYP01303 97 aa10.12□□□□□ -0.79
FOXR1-201ENST00000317011 PPBPP02775 128 aa10.12□□□□□ -0.79
FOXR1-201ENST00000317011 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
FOXR1-201ENST00000317011 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
FOXR1-201ENST00000317011 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
FOXR1-201ENST00000317011 PLA2G1BP04054 148 aaKnown RBP10.11□□□□□ -0.79
FOXR1-201ENST00000317011 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
FOXR1-201ENST00000317011 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
FOXR1-201ENST00000317011 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
FOXR1-201ENST00000317011 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 660 ms