RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TMSB15BA0A087X1C1 80 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 IGHV3-66A0A0C4DH42 116 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 RHODO00212 210 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 KLHL30-AS1Q8NEE0 82 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 TPPP3Q9BW30 176 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 RS1O15537 224 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 FOXI1Q12951 378 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 H3BMM0 161 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 PLGLAQ15195 96 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 C1orf158Q8N1D5 194 aa5.52□□□□□ -1.53
CNOT4-201ENST00000315544 NAA38Q9BRA0 125 aaKnown RBP5.52□□□□□ -1.53
CNOT4-201ENST00000315544 TRBV30A0A0K0K1B3 111 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 XGP55808 180 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 ATP5G2Q06055 141 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 SIGMAR1Q99720 223 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 C1QTNF4Q9BXJ3 329 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 SPG11Q96JI7 2443 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 ARL3P36405 182 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 UBE2E2Q96LR5 201 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 OPRPNQ99935 248 aaPredicted RBP5.51□□□□□ -1.53
CNOT4-201ENST00000315544 RHPN1-AS1Q9BWJ2 59 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 ABCA1O95477 2261 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 LEPROTO15243 131 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 COX6A2Q02221 97 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 TMEM95Q3KNT9 176 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 FAM110AQ9BQ89 295 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 VPREB3Q9UKI3 123 aa5.51□□□□□ -1.53
CNOT4-201ENST00000315544 KMT2CQ8NEZ4 4911 aaKnown RBP5.5□□□□□ -1.53
CNOT4-201ENST00000315544 NMUP48645 174 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 BRD3OSQ6XYD6 125 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 VCX2Q9H322 139 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 DYNC1H1Q14204 4646 aaKnown RBP5.5□□□□□ -1.53
CNOT4-201ENST00000315544 TINCRA0A1B0GVN0 87 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 SYT8Q8NBV8 401 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 TIMD4Q96H15 378 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 IGHV3OR16-12A0A075B7B8 117 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 IGHV3-35A0A0C4DH35 117 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 A8MZ25 164 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 CNIH1O95406 144 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 NANOS2P60321 138 aaKnown RBP5.5□□□□□ -1.53
CNOT4-201ENST00000315544 SCGB2A2Q13296 93 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 PMVKQ15126 192 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 TMEM78Q5T7P6 136 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 ZFAND6Q6FIF0 208 aa5.5□□□□□ -1.53
CNOT4-201ENST00000315544 LINC01549A6NIU2 74 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 ZNF207O43670 478 aaKnown RBP5.49□□□□□ -1.53
CNOT4-201ENST00000315544 SH2D6Q7Z4S9 175 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 CD300EQ496F6 205 aaPredicted RBP5.49□□□□□ -1.53
CNOT4-201ENST00000315544 C2orf82Q6UX34 121 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 VSIG2Q96IQ7 327 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 IGHV3-53P01767 116 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 PRM2P04554 102 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 DEFB112Q30KQ8 113 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 Q8NDZ9 215 aa5.49□□□□□ -1.53
CNOT4-201ENST00000315544 IGKV2-28A0A075B6P5 120 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 A6NDN8 102 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 IGKV2D-28P01615 120 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 BATFQ16520 125 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 Q6ZSV7 163 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 TRPT1Q86TN4 253 aaKnown RBP5.48□□□□□ -1.53
CNOT4-201ENST00000315544 A6NJY4 79 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 TIRAPP58753 221 aa5.48□□□□□ -1.53
CNOT4-201ENST00000315544 IGHV4-59P01825 116 aa5.47□□□□□ -1.53
CNOT4-201ENST00000315544 SMCR5Q8TEV8 140 aa5.47□□□□□ -1.53
CNOT4-201ENST00000315544 OVOL2Q9BRP0 275 aa5.47□□□□□ -1.53
CNOT4-201ENST00000315544 SPCS1Q9Y6A9 102 aa5.47□□□□□ -1.53
CNOT4-201ENST00000315544 TP53TG1Q9Y2A0 90 aa5.47□□□□□ -1.53
CNOT4-201ENST00000315544 LINC00527Q9UJ94 153 aa5.47□□□□□ -1.53
CNOT4-201ENST00000315544 H3BUX3 64 aa5.46□□□□□ -1.53
CNOT4-201ENST00000315544 S100A7AQ86SG5 101 aa5.46□□□□□ -1.53
CNOT4-201ENST00000315544 OR4C5Q8NGB2 326 aa5.46□□□□□ -1.53
CNOT4-201ENST00000315544 C4orf3Q8WVX3 66 aa5.46□□□□□ -1.53
CNOT4-201ENST00000315544 FLNBO75369 2602 aaKnown RBP5.46□□□□□ -1.53
CNOT4-201ENST00000315544 CREBBPQ92793 2442 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 NCBP2LA6PVI3 153 aaKnown RBP5.46□□□□□ -1.54
CNOT4-201ENST00000315544 ORM1P02763 201 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 ECSCRQ19T08 205 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 LINC01006Q8NI28 216 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 GTSF1LQ9H1H1 148 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 MYO9AB2RTY4 2548 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 GAGE10A6NGK3 116 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 LINC00242Q5T6M2 205 aa5.46□□□□□ -1.54
CNOT4-201ENST00000315544 IGHV3OR16-10A0A075B7F0 116 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 IGHV3-30-3P0DP02 117 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 Q6Q795 121 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 LYPD5Q6UWN5 251 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 H7C423 109 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 C9orf129Q5T035 196 aaKnown RBP5.45□□□□□ -1.54
CNOT4-201ENST00000315544 SMIM1B2RUZ4 78 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 NDUFA1O15239 70 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 AZU1P20160 251 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 ASIPP42127 132 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 MAPK1IP1LQ8NDC0 245 aa5.45□□□□□ -1.54
CNOT4-201ENST00000315544 IGHV3-49A0A0A0MS15 119 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms