RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 CSNK1G2-AS1Q8NCQ2 148 aa13.3□□□□□ -0.28
HCLS1-201ENST00000314583 C9orf66Q5T8R8 295 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 NFE4Q86UQ8 179 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 MAPKAPK5-AS1Q8N8E1 139 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 MYMXA0A1B0GTQ4 84 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 TAL2Q16559 108 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 PRADC1Q9BSG0 188 aa13.29□□□□□ -0.28
HCLS1-201ENST00000314583 SETD2Q9BYW2 2564 aaPredicted RBP13.28□□□□□ -0.28
HCLS1-201ENST00000314583 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
HCLS1-201ENST00000314583 CIDEAO60543 219 aa13.28□□□□□ -0.28
HCLS1-201ENST00000314583 RRN3P1Q2M238 152 aa13.28□□□□□ -0.28
HCLS1-201ENST00000314583 C2CD3Q4AC94 2353 aa13.28□□□□□ -0.28
HCLS1-201ENST00000314583 COTL1Q14019 142 aa13.27□□□□□ -0.28
HCLS1-201ENST00000314583 Q6ZTI0 123 aa13.27□□□□□ -0.28
HCLS1-201ENST00000314583 VCX2Q9H322 139 aa13.27□□□□□ -0.28
HCLS1-201ENST00000314583 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.28
HCLS1-201ENST00000314583 CHCHD7Q9BUK0 85 aa13.27□□□□□ -0.29
HCLS1-201ENST00000314583 K7EQD1 137 aa13.26□□□□□ -0.29
HCLS1-201ENST00000314583 Q6ZVH6 145 aa13.26□□□□□ -0.29
HCLS1-201ENST00000314583 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
HCLS1-201ENST00000314583 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
HCLS1-201ENST00000314583 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
HCLS1-201ENST00000314583 PLAC8L1A1L4L8 177 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 H3BRM9 83 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 ZNF479Q96JC4 524 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 Q9UF83 564 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 EMP1P54849 157 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 ZNRF2Q8NHG8 242 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 AMELXQ99217 191 aa13.25□□□□□ -0.29
HCLS1-201ENST00000314583 OPRPNQ99935 248 aaPredicted RBP13.25□□□□□ -0.29
HCLS1-201ENST00000314583 TRBV7-3A0A075B6L6 115 aa13.24□□□□□ -0.29
HCLS1-201ENST00000314583 RPL36AP83881 106 aaKnown RBP13.24□□□□□ -0.29
HCLS1-201ENST00000314583 TMEM170BQ5T4T1 132 aa13.24□□□□□ -0.29
HCLS1-201ENST00000314583 RPL36ALQ969Q0 106 aaKnown RBP13.24□□□□□ -0.29
HCLS1-201ENST00000314583 GCSHP23434 173 aa13.23□□□□□ -0.29
HCLS1-201ENST00000314583 CEND1Q8N111 149 aa13.23□□□□□ -0.29
HCLS1-201ENST00000314583 TM2D2Q9BX73 214 aa13.23□□□□□ -0.29
HCLS1-201ENST00000314583 PHLDA1Q8WV24 401 aaPredicted RBP13.23□□□□□ -0.29
HCLS1-201ENST00000314583 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
HCLS1-201ENST00000314583 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
HCLS1-201ENST00000314583 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
HCLS1-201ENST00000314583 DAZ4Q86SG3 579 aaKnown RBP13.21□□□□□ -0.29
HCLS1-201ENST00000314583 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.29
HCLS1-201ENST00000314583 DAZ3Q9NR90 486 aaKnown RBP13.21□□□□□ -0.29
HCLS1-201ENST00000314583 IGHV3-38A0A0C4DH36 116 aa13.2□□□□□ -0.3
HCLS1-201ENST00000314583 VAMP3Q15836 100 aa13.2□□□□□ -0.3
HCLS1-201ENST00000314583 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
HCLS1-201ENST00000314583 FXYD2P54710 66 aa13.2□□□□□ -0.3
HCLS1-201ENST00000314583 TMEM223A0PJW6 202 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 C9orf118A6NHY6 69 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE7O76087 117 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 ZNF22P17026 224 aaPredicted RBP13.19□□□□□ -0.3
HCLS1-201ENST00000314583 PTTG1IPP53801 180 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 HIST1H4GQ99525 98 aa13.19□□□□□ -0.3
HCLS1-201ENST00000314583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.18□□□□□ -0.3
HCLS1-201ENST00000314583 IGKV2-29A2NJV5 120 aaPredicted RBP13.18□□□□□ -0.3
HCLS1-201ENST00000314583 SMIM13P0DJ93 91 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 MRPS36P82909 103 aaKnown RBP13.18□□□□□ -0.3
HCLS1-201ENST00000314583 SLC25A29Q8N8R3 303 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 F8P00451 2351 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 TRBV6-4A0A1B0GX49 114 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 CYSRT1A8MQ03 144 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 LEPROTO15243 131 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 UBE2D3P61077 147 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 UBE2D2P62837 147 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 SCGB1D4Q6XE38 83 aa13.18□□□□□ -0.3
HCLS1-201ENST00000314583 SMIM9A6NGZ8 99 aa13.17□□□□□ -0.3
HCLS1-201ENST00000314583 J3QQQ9 107 aa13.16□□□□□ -0.3
HCLS1-201ENST00000314583 LGALS3P17931 250 aaKnown RBP13.16□□□□□ -0.3
HCLS1-201ENST00000314583 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
HCLS1-201ENST00000314583 WFDC9Q8NEX5 89 aa13.16□□□□□ -0.3
HCLS1-201ENST00000314583 PLEKHB2Q96CS7 222 aa13.16□□□□□ -0.3
HCLS1-201ENST00000314583 NIPBLQ6KC79 2804 aaeCLIP13.15□□□□□ -0.3
HCLS1-201ENST00000314583 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE4Q13068 117 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE5Q13069 117 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 KRTAP24-1Q3LI83 254 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 Q6ZUT4 128 aa13.15□□□□□ -0.3
HCLS1-201ENST00000314583 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
HCLS1-201ENST00000314583 CCL25O15444 150 aa13.14□□□□□ -0.31
HCLS1-201ENST00000314583 GTSF1LQ9H1H1 148 aa13.14□□□□□ -0.31
HCLS1-201ENST00000314583 TSPEAR-AS2P59090 65 aa13.13□□□□□ -0.31
HCLS1-201ENST00000314583 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
HCLS1-201ENST00000314583 CSDC2Q9Y534 153 aaKnown RBP13.13□□□□□ -0.31
HCLS1-201ENST00000314583 K7EP13 123 aa13.13□□□□□ -0.31
HCLS1-201ENST00000314583 AMMECR1LQ6DCA0 310 aa13.13□□□□□ -0.31
HCLS1-201ENST00000314583 LINC00612Q8N6U2 182 aa13.13□□□□□ -0.31
HCLS1-201ENST00000314583 NHP2Q9NX24 153 aaKnown RBP13.13□□□□□ -0.31
HCLS1-201ENST00000314583 WIPF1O43516 503 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms