RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
CHMP2A-201ENST00000312547 MAP1LC3AQ9H492 121 aa8.64□□□□□ -1.03
CHMP2A-201ENST00000312547 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
CHMP2A-201ENST00000312547 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
CHMP2A-201ENST00000312547 LCE6AA0A183 80 aa8.63□□□□□ -1.03
CHMP2A-201ENST00000312547 ESDP10768 282 aa8.63□□□□□ -1.03
CHMP2A-201ENST00000312547 DEFB104AQ8WTQ1 72 aa8.63□□□□□ -1.03
CHMP2A-201ENST00000312547 KIR2DL4Q99706 377 aa8.63□□□□□ -1.03
CHMP2A-201ENST00000312547 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 LY6G6CO95867 125 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 Q8N8P6 123 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 Q9H8V8 135 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 FRAS1Q86XX4 4008 aa8.62□□□□□ -1.03
CHMP2A-201ENST00000312547 TCAPO15273 167 aa8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 SIVA1O15304 175 aa8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 AMTP48728 403 aa8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 NIT1Q86X76 327 aa8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 NXT2Q9NPJ8 142 aaKnown RBP8.61□□□□□ -1.03
CHMP2A-201ENST00000312547 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
CHMP2A-201ENST00000312547 IFI27P40305 119 aaPredicted RBP8.6□□□□□ -1.03
CHMP2A-201ENST00000312547 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
CHMP2A-201ENST00000312547 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
CHMP2A-201ENST00000312547 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
CHMP2A-201ENST00000312547 K7EMI3 77 aa8.59□□□□□ -1.03
CHMP2A-201ENST00000312547 FCER1GP30273 86 aa8.59□□□□□ -1.03
CHMP2A-201ENST00000312547 Q8N3U1 123 aa8.59□□□□□ -1.03
CHMP2A-201ENST00000312547 H7C423 109 aa8.58□□□□□ -1.04
CHMP2A-201ENST00000312547 PKIAP61925 76 aa8.58□□□□□ -1.04
CHMP2A-201ENST00000312547 GAGE6Q13070 117 aa8.58□□□□□ -1.04
CHMP2A-201ENST00000312547 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
CHMP2A-201ENST00000312547 PRSS3P2Q8NHM4 247 aa8.58□□□□□ -1.04
CHMP2A-201ENST00000312547 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
CHMP2A-201ENST00000312547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 K7EP13 123 aa8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 RBX1P62877 108 aa8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 Q0VG73 95 aa8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 Q6ZR54 194 aa8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
CHMP2A-201ENST00000312547 NBDYA0A0U1RRE5 68 aa8.56□□□□□ -1.04
CHMP2A-201ENST00000312547 A0A1B0GUV1 79 aa8.56□□□□□ -1.04
CHMP2A-201ENST00000312547 TMEM262E9PQX1 116 aa8.56□□□□□ -1.04
CHMP2A-201ENST00000312547 LAGE3Q14657 143 aa8.56□□□□□ -1.04
CHMP2A-201ENST00000312547 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
CHMP2A-201ENST00000312547 MRPL52Q86TS9 123 aaKnown RBP8.56□□□□□ -1.04
CHMP2A-201ENST00000312547 A0A087WX48 190 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 UBE2L6O14933 153 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 FGF6P10767 208 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 FA2HQ7L5A8 372 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 Q8N976 141 aa8.55□□□□□ -1.04
CHMP2A-201ENST00000312547 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BKO60814 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BJP06899 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 LINC00614P0C842 121 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 ZNF25P17030 456 aaPredicted RBP8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BOP23527 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BBP33778 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BDP58876 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BCP62807 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST2H2BEQ16778 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 TTC32Q5I0X7 151 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BHQ93079 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BNQ99877 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 HIST1H2BMQ99879 126 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 TIMM21Q9BVV7 248 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 CSDC2Q9Y534 153 aaKnown RBP8.54□□□□□ -1.04
CHMP2A-201ENST00000312547 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 LINC00310P59036 64 aa8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 RAB5BP61020 215 aa8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 DNAH10Q8IVF4 4471 aa8.53□□□□□ -1.04
CHMP2A-201ENST00000312547 A0A096LNJ9 63 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 KLK12Q9UKR0 248 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 CYSLTR1Q9Y271 337 aa8.52□□□□□ -1.05
CHMP2A-201ENST00000312547 HERC2O95714 4834 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 C1orf196B1AJZ1 125 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 M0R2N4 97 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms