RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 H3BMM0 161 aa14.02□□□□□ -0.17
HERPUD2-201ENST00000311350 POLR2KP53803 58 aaKnown RBP14.02□□□□□ -0.17
HERPUD2-201ENST00000311350 UBE2WQ96B02 151 aa14.02□□□□□ -0.17
HERPUD2-201ENST00000311350 KIF25-AS1Q9Y6Z4 181 aa14.02□□□□□ -0.17
HERPUD2-201ENST00000311350 A0A0B4J2C4 111 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 TRBV10-2A0A0K0K1G8 114 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 LGALS9O00182 355 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 SUMO4Q6EEV6 95 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 Q6ZSV7 163 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 IGHG2P01859 326 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 RPL13AP40429 203 aaKnown RBP14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 DUX3Q96PT4 197 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 SMR3AQ99954 134 aa14.01□□□□□ -0.17
HERPUD2-201ENST00000311350 TRBV12-3P01733 135 aa14□□□□□ -0.17
HERPUD2-201ENST00000311350 ZNF56Q15929 161 aa14□□□□□ -0.17
HERPUD2-201ENST00000311350 TMEM141Q96I45 108 aa14□□□□□ -0.17
HERPUD2-201ENST00000311350 ZNF256Q9Y2P7 627 aaPredicted RBP14□□□□□ -0.17
HERPUD2-201ENST00000311350 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 TMEM223A0PJW6 202 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 KLLNB2CW77 178 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 F5H697 171 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 SDHAF1A6NFY7 115 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 H7C423 109 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 TIMM17AQ99595 171 aa13.99□□□□□ -0.17
HERPUD2-201ENST00000311350 LEPROTO15243 131 aa13.98□□□□□ -0.17
HERPUD2-201ENST00000311350 LINC00527Q9UJ94 153 aa13.98□□□□□ -0.17
HERPUD2-201ENST00000311350 NF1P21359 2839 aa13.97□□□□□ -0.17
HERPUD2-201ENST00000311350 SETD2Q9BYW2 2564 aaPredicted RBP13.97□□□□□ -0.17
HERPUD2-201ENST00000311350 MDFICQ9P1T7 246 aa13.97□□□□□ -0.17
HERPUD2-201ENST00000311350 K7EMT4 169 aa13.97□□□□□ -0.17
HERPUD2-201ENST00000311350 VCYO14598 125 aa13.97□□□□□ -0.17
HERPUD2-201ENST00000311350 CLEC2BQ92478 149 aa13.97□□□□□ -0.17
HERPUD2-201ENST00000311350 A6NDX4 124 aa13.96□□□□□ -0.17
HERPUD2-201ENST00000311350 NPC2P61916 151 aa13.96□□□□□ -0.17
HERPUD2-201ENST00000311350 RHPN1-AS1Q9BWJ2 59 aa13.96□□□□□ -0.17
HERPUD2-201ENST00000311350 A0A0J9YXV3 536 aa13.96□□□□□ -0.18
HERPUD2-201ENST00000311350 ZNF22P17026 224 aaPredicted RBP13.96□□□□□ -0.18
HERPUD2-201ENST00000311350 C2CD3Q4AC94 2353 aa13.96□□□□□ -0.18
HERPUD2-201ENST00000311350 TRBV6-5A0A0K0K1A5 114 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 M0R2P5 195 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 ID1P41134 155 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 FAM74A4Q5TZK3 123 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 A0A0J9YXY3 114 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 TRBV30A0A0K0K1B3 111 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 LY6G6DO95868 133 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 PRSS2P07478 247 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 PPDPFQ9H3Y8 114 aa13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 DAZ1Q9NQZ3 744 aaKnown RBP13.95□□□□□ -0.18
HERPUD2-201ENST00000311350 IGLV1-40P01703 118 aa13.94□□□□□ -0.18
HERPUD2-201ENST00000311350 TNFRSF18Q9Y5U5 241 aa13.94□□□□□ -0.18
HERPUD2-201ENST00000311350 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.93□□□□□ -0.18
HERPUD2-201ENST00000311350 ADAMTSL4-AS1Q5T5F5 129 aa13.93□□□□□ -0.18
HERPUD2-201ENST00000311350 RPL11P62913 178 aaKnown RBP13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 NIPBLQ6KC79 2804 aaeCLIP13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 LINC01600Q96MT4 127 aa13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 LINC01587Q99440 93 aa13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 ICOSQ9Y6W8 199 aa13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 DSCR9P59020 149 aa13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 SPXQ9BT56 116 aa13.92□□□□□ -0.18
HERPUD2-201ENST00000311350 TRBV27A0A0K0K1C4 114 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 MAPK1IP1LQ8NDC0 245 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 LITAFQ99732 161 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 PIMREGQ9BSJ6 248 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 ZANQ9Y493 2812 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 PF4V1P10720 104 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 CFHR3Q02985 330 aa13.91□□□□□ -0.18
HERPUD2-201ENST00000311350 IGHV3OR16-10A0A075B7F0 116 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 IGHV4-30-2A0A087WSY4 118 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 TRAV8-3A0A0A6YYJ7 113 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 IGHV3-11P01762 117 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 BRD3OSQ6XYD6 125 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 C9orf85Q96MD7 179 aa13.9□□□□□ -0.18
HERPUD2-201ENST00000311350 A8MZ25 164 aa13.89□□□□□ -0.19
HERPUD2-201ENST00000311350 RHOHQ15669 191 aa13.89□□□□□ -0.19
HERPUD2-201ENST00000311350 CEMP1Q6PRD7 247 aaPredicted RBP13.89□□□□□ -0.19
HERPUD2-201ENST00000311350 DCANP1Q8TF63 244 aa13.89□□□□□ -0.19
HERPUD2-201ENST00000311350 IGHV3-30-3P0DP02 117 aa13.88□□□□□ -0.19
HERPUD2-201ENST00000311350 TMEM95Q3KNT9 176 aa13.88□□□□□ -0.19
HERPUD2-201ENST00000311350 CSPG4Q6UVK1 2322 aa13.88□□□□□ -0.19
HERPUD2-201ENST00000311350 H3BUX3 64 aa13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 C10orf105Q8TEF2 133 aa13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 NSD1Q96L73 2696 aaPredicted RBP13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 IGHV4-61A0A0C4DH41 118 aa13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 KRTAP1-1Q07627 177 aa13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 LY6EQ16553 131 aa13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 NSUN5P1Q3KNT7 163 aa13.87□□□□□ -0.19
HERPUD2-201ENST00000311350 IGHV4-38-2P0DP08 117 aa13.86□□□□□ -0.19
HERPUD2-201ENST00000311350 RNASE13Q5GAN3 156 aaKnown RBP13.86□□□□□ -0.19
HERPUD2-201ENST00000311350 TRGV11A0A075B6L2 103 aa13.86□□□□□ -0.19
HERPUD2-201ENST00000311350 A0A096LNT2 108 aa13.86□□□□□ -0.19
HERPUD2-201ENST00000311350 FAM236AA0A1B0GUQ0 79 aa13.86□□□□□ -0.19
HERPUD2-201ENST00000311350 FAM236BA0A1B0GV22 79 aa13.86□□□□□ -0.19
HERPUD2-201ENST00000311350 IGLV4-3A0A075B6K6 122 aa13.85□□□□□ -0.19
HERPUD2-201ENST00000311350 TRAV12-3A0A0B4J271 114 aa13.85□□□□□ -0.19
HERPUD2-201ENST00000311350 IGHV3-16A0A0C4DH30 117 aa13.85□□□□□ -0.19
HERPUD2-201ENST00000311350 I3L3M4 83 aa13.85□□□□□ -0.19
HERPUD2-201ENST00000311350 TLN2Q9Y4G6 2542 aa13.85□□□□□ -0.19
HERPUD2-201ENST00000311350 H3BT86 120 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 846.6 ms