RNA–Protein interactions for RNA: ENST00000311330.3

CD248-201, Transcript of CD248 molecule, humanhuman

APPRIS P1 BASIC

Gene CD248, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD248-201ENST00000311330 C16orf95Q9H693 158 aa13.34□□□□□ -0.27
CD248-201ENST00000311330 CEMP1Q6PRD7 247 aaPredicted RBP13.34□□□□□ -0.27
CD248-201ENST00000311330 SCGB2A2Q13296 93 aa13.33□□□□□ -0.28
CD248-201ENST00000311330 HIVEP2P31629 2446 aa13.33□□□□□ -0.28
CD248-201ENST00000311330 IGHV3-38A0A0C4DH36 116 aa13.32□□□□□ -0.28
CD248-201ENST00000311330 CIDEAO60543 219 aa13.32□□□□□ -0.28
CD248-201ENST00000311330 ZNF418Q8TF45 676 aaPredicted RBP13.32□□□□□ -0.28
CD248-201ENST00000311330 TRBV7-3A0A075B6L6 115 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 TSPEAR-AS2P59090 65 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 PHLDA1Q8WV24 401 aaPredicted RBP13.31□□□□□ -0.28
CD248-201ENST00000311330 LINC00467Q9BRT7 94 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 SPCS1Q9Y6A9 102 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 IGLV4-3A0A075B6K6 122 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 RNASE13Q5GAN3 156 aaKnown RBP13.31□□□□□ -0.28
CD248-201ENST00000311330 PAPPA-AS1Q5QFB9 102 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 SCGB1D4Q6XE38 83 aa13.31□□□□□ -0.28
CD248-201ENST00000311330 HILS1P60008 231 aa13.3□□□□□ -0.28
CD248-201ENST00000311330 SPXQ9BT56 116 aa13.3□□□□□ -0.28
CD248-201ENST00000311330 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
CD248-201ENST00000311330 A0A1W2PPM0 123 aa13.3□□□□□ -0.28
CD248-201ENST00000311330 ADARB2-AS1A8MUL3 147 aa13.3□□□□□ -0.28
CD248-201ENST00000311330 A0A0J9YXV3 536 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 HERVK_113P61574 105 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 BEAN1Q3B7T3 259 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 SAMD5Q5TGI4 173 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 TRGV1A0A0A0MS02 117 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 TAL2Q16559 108 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 VCX2Q9H322 139 aa13.29□□□□□ -0.28
CD248-201ENST00000311330 IGHV3-64A0A075B6Q5 118 aa13.28□□□□□ -0.28
CD248-201ENST00000311330 PIK3CD-AS1Q5SR53 167 aa13.28□□□□□ -0.28
CD248-201ENST00000311330 RS1O15537 224 aa13.28□□□□□ -0.28
CD248-201ENST00000311330 PTH2Q96A98 100 aa13.28□□□□□ -0.28
CD248-201ENST00000311330 IGHV3-53P01767 116 aa13.27□□□□□ -0.28
CD248-201ENST00000311330 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.28
CD248-201ENST00000311330 C12orf74Q32Q52 190 aa13.27□□□□□ -0.28
CD248-201ENST00000311330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.27□□□□□ -0.29
CD248-201ENST00000311330 IGKV2-29A2NJV5 120 aaPredicted RBP13.27□□□□□ -0.29
CD248-201ENST00000311330 GIG44P09565 113 aaPredicted RBP13.27□□□□□ -0.29
CD248-201ENST00000311330 RPL24P83731 157 aaKnown RBP13.27□□□□□ -0.29
CD248-201ENST00000311330 Q6ZTI0 123 aa13.27□□□□□ -0.29
CD248-201ENST00000311330 OR5A1Q8NGJ0 315 aa13.27□□□□□ -0.29
CD248-201ENST00000311330 RHODO00212 210 aa13.26□□□□□ -0.29
CD248-201ENST00000311330 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
CD248-201ENST00000311330 CHCHD7Q9BUK0 85 aa13.26□□□□□ -0.29
CD248-201ENST00000311330 ZNF479Q96JC4 524 aa13.26□□□□□ -0.29
CD248-201ENST00000311330 IGLV1-51P01701 117 aa13.25□□□□□ -0.29
CD248-201ENST00000311330 FABP2P12104 132 aa13.25□□□□□ -0.29
CD248-201ENST00000311330 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
CD248-201ENST00000311330 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.29
CD248-201ENST00000311330 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
CD248-201ENST00000311330 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
CD248-201ENST00000311330 J3QQQ9 107 aa13.24□□□□□ -0.29
CD248-201ENST00000311330 LY6G6DO95868 133 aa13.24□□□□□ -0.29
CD248-201ENST00000311330 IGLL5B9A064 214 aa13.24□□□□□ -0.29
CD248-201ENST00000311330 A0A0J9YY99 117 aa13.23□□□□□ -0.29
CD248-201ENST00000311330 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
CD248-201ENST00000311330 IL17DQ8TAD2 202 aa13.23□□□□□ -0.29
CD248-201ENST00000311330 C19orf73Q9NVV2 129 aa13.23□□□□□ -0.29
CD248-201ENST00000311330 AMELXQ99217 191 aa13.23□□□□□ -0.29
CD248-201ENST00000311330 PYGO1Q9Y3Y4 419 aa13.23□□□□□ -0.29
CD248-201ENST00000311330 C2CD3Q4AC94 2353 aa13.22□□□□□ -0.29
CD248-201ENST00000311330 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
CD248-201ENST00000311330 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
CD248-201ENST00000311330 LGALS3P17931 250 aaKnown RBP13.22□□□□□ -0.29
CD248-201ENST00000311330 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.29
CD248-201ENST00000311330 NDUFA7O95182 113 aa13.21□□□□□ -0.29
CD248-201ENST00000311330 UBE2D4Q9Y2X8 147 aa13.21□□□□□ -0.29
CD248-201ENST00000311330 TMEM263Q8WUH6 116 aaKnown RBP13.21□□□□□ -0.3
CD248-201ENST00000311330 DNAJC30Q96LL9 226 aa13.2□□□□□ -0.3
CD248-201ENST00000311330 Q6ZUT4 128 aa13.2□□□□□ -0.3
CD248-201ENST00000311330 SMAGPQ0VAQ4 97 aa13.19□□□□□ -0.3
CD248-201ENST00000311330 LEPROTO15243 131 aa13.19□□□□□ -0.3
CD248-201ENST00000311330 OTOGQ6ZRI0 2925 aa13.18□□□□□ -0.3
CD248-201ENST00000311330 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
CD248-201ENST00000311330 A0A1B0GWB2 263 aa13.18□□□□□ -0.3
CD248-201ENST00000311330 PLAC8L1A1L4L8 177 aa13.17□□□□□ -0.3
CD248-201ENST00000311330 CMC4P56277 68 aaPredicted RBP13.17□□□□□ -0.3
CD248-201ENST00000311330 MRPS36P82909 103 aaKnown RBP13.17□□□□□ -0.3
CD248-201ENST00000311330 SLC25A29Q8N8R3 303 aa13.17□□□□□ -0.3
CD248-201ENST00000311330 SPANXA1Q9NS26 97 aa13.17□□□□□ -0.3
CD248-201ENST00000311330 GAGE7O76087 117 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 GAGE12FP0CL80 117 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 GAGE12GP0CL81 117 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 GAGE12IP0CL82 117 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 APOMO95445 188 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 SIGMAR1Q99720 223 aa13.16□□□□□ -0.3
CD248-201ENST00000311330 A8MZ25 164 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 INAFM1C9JVW0 142 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 PF4P02776 101 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 K7EQD1 137 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 GAGE4Q13068 117 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 GAGE5Q13069 117 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.3
CD248-201ENST00000311330 PGPEP1Q9NXJ5 209 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms