RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 CNFNQ9BYD5 112 aa13.5□□□□□ -0.25
ATP2A3-201ENST00000309890 ATOX1O00244 68 aa13.49□□□□□ -0.25
ATP2A3-201ENST00000309890 JMJD1CQ15652 2540 aa13.49□□□□□ -0.25
ATP2A3-201ENST00000309890 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
ATP2A3-201ENST00000309890 RBMY1FQ15415 496 aaKnown RBP13.49□□□□□ -0.25
ATP2A3-201ENST00000309890 C11orf71Q6IPW1 123 aa13.49□□□□□ -0.25
ATP2A3-201ENST00000309890 C4orf3Q8WVX3 66 aa13.49□□□□□ -0.25
ATP2A3-201ENST00000309890 MIR7-3HGQ8N6C7 128 aa13.48□□□□□ -0.25
ATP2A3-201ENST00000309890 TMEM263Q8WUH6 116 aaKnown RBP13.48□□□□□ -0.25
ATP2A3-201ENST00000309890 C11orf21Q9P2W6 132 aa13.48□□□□□ -0.25
ATP2A3-201ENST00000309890 ZFYVE26Q68DK2 2539 aa13.48□□□□□ -0.25
ATP2A3-201ENST00000309890 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
ATP2A3-201ENST00000309890 MAP6D1Q9H9H5 199 aa13.48□□□□□ -0.25
ATP2A3-201ENST00000309890 TRAV26-1A0A087WT03 109 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 P0DMU3 169 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 TRBV27A0A0K0K1C4 114 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 TMEM223A0PJW6 202 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 M0QY20 66 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 LECT2O14960 151 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 DEFB121Q5J5C9 76 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 C3orf56Q8N813 242 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 J3QKU1 62 aa13.47□□□□□ -0.25
ATP2A3-201ENST00000309890 IGHV4-4A0A075B6R2 117 aa13.46□□□□□ -0.25
ATP2A3-201ENST00000309890 MRPL23Q16540 153 aaKnown RBP13.46□□□□□ -0.25
ATP2A3-201ENST00000309890 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
ATP2A3-201ENST00000309890 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 ATP5G1P05496 136 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 SMIM20Q8N5G0 67 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 HHLA3Q9XRX5 114 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 CHD8Q9HCK8 2581 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 IGKV3D-7A0A0C4DH55 119 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
ATP2A3-201ENST00000309890 MT-ATP8P03928 68 aa13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 SETD2Q9BYW2 2564 aaPredicted RBP13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 RNASE3P12724 160 aaKnown RBP13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 LINC00643Q86TS7 51 aa13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 A0A1B0GX51 115 aa13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 MRPS12O15235 138 aaKnown RBP13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 GAS8-AS1O95177 125 aa13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 CXCL5P42830 114 aa13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 IGHV3-33P01772 117 aa13.43□□□□□ -0.26
ATP2A3-201ENST00000309890 C9orf66Q5T8R8 295 aa13.42□□□□□ -0.26
ATP2A3-201ENST00000309890 RMI2Q96E14 147 aa13.42□□□□□ -0.26
ATP2A3-201ENST00000309890 EXPH5Q8NEV8 1989 aa13.42□□□□□ -0.26
ATP2A3-201ENST00000309890 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
ATP2A3-201ENST00000309890 PRR9Q5T870 116 aa13.42□□□□□ -0.26
ATP2A3-201ENST00000309890 LINC00467Q9BRT7 94 aa13.42□□□□□ -0.26
ATP2A3-201ENST00000309890 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
ATP2A3-201ENST00000309890 HIST2H2BDQ6DRA6 164 aa13.41□□□□□ -0.26
ATP2A3-201ENST00000309890 CDK2AP2O75956 126 aa13.41□□□□□ -0.26
ATP2A3-201ENST00000309890 POLR2KP53803 58 aaKnown RBP13.4□□□□□ -0.26
ATP2A3-201ENST00000309890 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
ATP2A3-201ENST00000309890 TEX49A0A1B0GTD5 131 aa13.4□□□□□ -0.26
ATP2A3-201ENST00000309890 PYGO1Q9Y3Y4 419 aa13.4□□□□□ -0.26
ATP2A3-201ENST00000309890 CAMK2N2Q96S95 79 aa13.39□□□□□ -0.27
ATP2A3-201ENST00000309890 C1orf43Q9BWL3 253 aa13.39□□□□□ -0.27
ATP2A3-201ENST00000309890 USP9XQ93008 2570 aaPredicted RBP13.39□□□□□ -0.27
ATP2A3-201ENST00000309890 TRBV30A0A0K0K1B3 111 aa13.39□□□□□ -0.27
ATP2A3-201ENST00000309890 KLLNB2CW77 178 aa13.39□□□□□ -0.27
ATP2A3-201ENST00000309890 Q6ZTI0 123 aa13.39□□□□□ -0.27
ATP2A3-201ENST00000309890 IGKV2D-24A0A075B6R9 120 aa13.38□□□□□ -0.27
ATP2A3-201ENST00000309890 H3BQ85 93 aa13.38□□□□□ -0.27
ATP2A3-201ENST00000309890 RNF183Q96D59 192 aa13.38□□□□□ -0.27
ATP2A3-201ENST00000309890 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
ATP2A3-201ENST00000309890 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
ATP2A3-201ENST00000309890 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 TRIAP1O43715 76 aa13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 PRB1P04280 392 aa13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 CITED2Q99967 270 aaPredicted RBP13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 Q9HAA7 133 aa13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 NDUFV3P56181 108 aaKnown RBP13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 TIRAPP58753 221 aa13.37□□□□□ -0.27
ATP2A3-201ENST00000309890 DEFB114Q30KQ6 69 aa13.36□□□□□ -0.27
ATP2A3-201ENST00000309890 CFAP126Q5VTH2 177 aa13.36□□□□□ -0.27
ATP2A3-201ENST00000309890 LINC00308Q8TCZ7 52 aa13.36□□□□□ -0.27
ATP2A3-201ENST00000309890 SPAG11BQ08648 103 aa13.35□□□□□ -0.27
ATP2A3-201ENST00000309890 USP9YO00507 2555 aaPredicted RBP13.35□□□□□ -0.27
ATP2A3-201ENST00000309890 Q6YL49 198 aa13.35□□□□□ -0.27
ATP2A3-201ENST00000309890 ESM1Q9NQ30 184 aa13.35□□□□□ -0.27
ATP2A3-201ENST00000309890 COX8CQ7Z4L0 72 aa13.35□□□□□ -0.27
ATP2A3-201ENST00000309890 TMEM256-PLSCR3K7ERE1 68 aa13.34□□□□□ -0.27
ATP2A3-201ENST00000309890 NDUFA1O15239 70 aa13.34□□□□□ -0.27
ATP2A3-201ENST00000309890 RBM3P98179 157 aaKnown RBP13.34□□□□□ -0.27
ATP2A3-201ENST00000309890 TSHBP01222 138 aa13.34□□□□□ -0.27
ATP2A3-201ENST00000309890 UFSP1Q6NVU6 142 aa13.34□□□□□ -0.27
ATP2A3-201ENST00000309890 ANKRD11Q6UB99 2663 aaPredicted RBP13.33□□□□□ -0.28
ATP2A3-201ENST00000309890 PSMB8P28062 276 aa13.33□□□□□ -0.28
ATP2A3-201ENST00000309890 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATP2A3-201ENST00000309890 ABCA12Q86UK0 2595 aa13.32□□□□□ -0.28
ATP2A3-201ENST00000309890 CRYGDP07320 174 aa13.32□□□□□ -0.28
ATP2A3-201ENST00000309890 C9orf85Q96MD7 179 aa13.32□□□□□ -0.28
ATP2A3-201ENST00000309890 C14orf132Q9NPU4 83 aa13.32□□□□□ -0.28
ATP2A3-201ENST00000309890 TIMM17BO60830 172 aa13.32□□□□□ -0.28
ATP2A3-201ENST00000309890 hADV29S1A0JD25 119 aa13.31□□□□□ -0.28
ATP2A3-201ENST00000309890 NCR3O14931 201 aa13.31□□□□□ -0.28
ATP2A3-201ENST00000309890 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms