RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CFC1BP0CG36 223 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 CFC1P0CG37 223 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 Q6ZTI0 123 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 ACANP16112 2415 aa8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 MRPL23Q16540 153 aaKnown RBP8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 CCL25O15444 150 aa8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 TRAV4A0A0B4J268 109 aa8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 INAFM1C9JVW0 142 aa8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 IGLL5B9A064 214 aa8.51□□□□□ -1.05
PCDHGC3-201ENST00000308177 ANKRD17O75179 2603 aaKnown RBP8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 DEFB4AO15263 64 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 PSCAO43653 123 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 LINC00310P59036 64 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 HERV-K104P63124 156 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 A4D1N5 150 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
PCDHGC3-201ENST00000308177 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
PCDHGC3-201ENST00000308177 M0QY20 66 aa8.49□□□□□ -1.05
PCDHGC3-201ENST00000308177 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
PCDHGC3-201ENST00000308177 IFITM1P13164 125 aa8.49□□□□□ -1.05
PCDHGC3-201ENST00000308177 MUSTN1Q8IVN3 82 aa8.49□□□□□ -1.05
PCDHGC3-201ENST00000308177 VSIG2Q96IQ7 327 aa8.49□□□□□ -1.05
PCDHGC3-201ENST00000308177 NRACQ8N912 160 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 LAMTOR3Q9UHA4 124 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 IGHV4-4A0A075B6R2 117 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 TEX48A0A1B0GUV7 120 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 BRI3O95415 125 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 ICOSQ9Y6W8 199 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 PLA2G2AP14555 144 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 GAGE2BQ13066 116 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 EDN2P20800 178 aa8.48□□□□□ -1.05
PCDHGC3-201ENST00000308177 Q6ZUT4 128 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 MRAPQ8TCY5 172 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 BBC3Q96PG8 261 aaPredicted RBP8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 TP73-AS1Q9UF72 201 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 PRO0255Q9UI72 69 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 A0A0C4DFX4 3053 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 IGLV10-54A0A075B6I4 117 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
PCDHGC3-201ENST00000308177 IGHV1-58A0A0C4DH39 117 aa8.46□□□□□ -1.05
PCDHGC3-201ENST00000308177 LY6G6DO95868 133 aa8.46□□□□□ -1.05
PCDHGC3-201ENST00000308177 HILS1P60008 231 aa8.46□□□□□ -1.05
PCDHGC3-201ENST00000308177 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
PCDHGC3-201ENST00000308177 CFAP126Q5VTH2 177 aa8.46□□□□□ -1.06
PCDHGC3-201ENST00000308177 COX8CQ7Z4L0 72 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 ZNF580Q9UK33 172 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 ZMAT4Q9H898 229 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 PROK1P58294 105 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 DAND5Q8N907 189 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
PCDHGC3-201ENST00000308177 TRIOO75962 3097 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 COX7A2LO14548 114 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGKV2D-26A0A0A0MRZ7 120 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 INAFM2P0DMQ5 153 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 CRYGDP07320 174 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 GAGE2AQ6NT46 116 aa8.44□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGLV4-3A0A075B6K6 122 aa8.43□□□□□ -1.06
PCDHGC3-201ENST00000308177 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
PCDHGC3-201ENST00000308177 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
PCDHGC3-201ENST00000308177 PRM2P04554 102 aa8.43□□□□□ -1.06
PCDHGC3-201ENST00000308177 POLR2KP53803 58 aaKnown RBP8.43□□□□□ -1.06
PCDHGC3-201ENST00000308177 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
PCDHGC3-201ENST00000308177 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 RMI2Q96E14 147 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 C1orf43Q9BWL3 253 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 RS1O15537 224 aa8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 NTN5Q8WTR8 489 aaPredicted RBP8.42□□□□□ -1.06
PCDHGC3-201ENST00000308177 WFDC10AQ9H1F0 79 aa8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 Q9HAA7 133 aa8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 CRYBA4P53673 196 aa8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 SOCS3O14543 225 aa8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 LINC00482Q8N8I6 264 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms