RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 USP17L23D6RBM5 183 aa11.14□□□□□ -0.63
HMGCLL1-202ENST00000308161 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
HMGCLL1-202ENST00000308161 RPL39LQ96EH5 51 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-202ENST00000308161 FAM210AQ96ND0 272 aa11.14□□□□□ -0.63
HMGCLL1-202ENST00000308161 REG3AQ06141 175 aa11.13□□□□□ -0.63
HMGCLL1-202ENST00000308161 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
HMGCLL1-202ENST00000308161 PRR34Q9NV39 138 aa11.13□□□□□ -0.63
HMGCLL1-202ENST00000308161 IGLV4-60A0A075B6I1 120 aa11.12□□□□□ -0.63
HMGCLL1-202ENST00000308161 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
HMGCLL1-202ENST00000308161 Q6ZSA8 131 aa11.12□□□□□ -0.63
HMGCLL1-202ENST00000308161 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
HMGCLL1-202ENST00000308161 C20orf203Q8NBC4 194 aa11.12□□□□□ -0.63
HMGCLL1-202ENST00000308161 SRRM2Q9UQ35 2752 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-202ENST00000308161 CT83Q5H943 113 aa11.1□□□□□ -0.63
HMGCLL1-202ENST00000308161 SCXQ7RTU7 201 aa11.1□□□□□ -0.63
HMGCLL1-202ENST00000308161 GFRA4Q9GZZ7 299 aa11.1□□□□□ -0.63
HMGCLL1-202ENST00000308161 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 A0A1B0GUV1 79 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 PRSS1P07477 247 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 KRTAP26-1Q6PEX3 210 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
HMGCLL1-202ENST00000308161 A0A1B0GUT8 65 aa11.08□□□□□ -0.64
HMGCLL1-202ENST00000308161 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
HMGCLL1-202ENST00000308161 APCSP02743 223 aa11.08□□□□□ -0.64
HMGCLL1-202ENST00000308161 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
HMGCLL1-202ENST00000308161 TEX261Q6UWH6 196 aa11.08□□□□□ -0.64
HMGCLL1-202ENST00000308161 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
HMGCLL1-202ENST00000308161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-202ENST00000308161 IGKV2-29A2NJV5 120 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-202ENST00000308161 NDUFS6O75380 124 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-202ENST00000308161 RNASEKQ6P5S7 137 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-202ENST00000308161 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 TRAV8-4A0A0B4J246 113 aa11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 PMCHP20382 165 aa11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 ADIRFQ15847 76 aa11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 CHAC1Q9BUX1 264 aa11.06□□□□□ -0.64
HMGCLL1-202ENST00000308161 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
HMGCLL1-202ENST00000308161 hDV102S1A0JD36 115 aa11.05□□□□□ -0.64
HMGCLL1-202ENST00000308161 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-202ENST00000308161 V9GYV3 84 aa11.05□□□□□ -0.64
HMGCLL1-202ENST00000308161 C9JQL5 133 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 I3L3M4 83 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 NCR2O95944 276 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 RPL23P62829 140 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 CIRBP-AS1Q8TBR5 109 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 ISOC2Q96AB3 205 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 TMEM191AQ9H0A3 160 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 ST20Q9HBF5 79 aa11.04□□□□□ -0.64
HMGCLL1-202ENST00000308161 SRSF3P84103 164 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-202ENST00000308161 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
HMGCLL1-202ENST00000308161 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
HMGCLL1-202ENST00000308161 NUP35Q8NFH5 326 aa11.03□□□□□ -0.64
HMGCLL1-202ENST00000308161 TMEM242Q9NWH2 141 aa11.03□□□□□ -0.64
HMGCLL1-202ENST00000308161 FAM231BA6NCW3 169 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 FGF6P10767 208 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 RPS10P46783 165 aaKnown RBP11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 RIGQ13278 110 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 PEA15Q15121 130 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 CLRN3Q8NCR9 226 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 NAT8Q9UHE5 227 aa11.02□□□□□ -0.65
HMGCLL1-202ENST00000308161 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
HMGCLL1-202ENST00000308161 TRBV6-5A0A0K0K1A5 114 aa11.01□□□□□ -0.65
HMGCLL1-202ENST00000308161 SMKR1H3BMG3 65 aa11.01□□□□□ -0.65
HMGCLL1-202ENST00000308161 RAB4AP20338 218 aa11.01□□□□□ -0.65
HMGCLL1-202ENST00000308161 AP5S1Q9NUS5 200 aa11.01□□□□□ -0.65
HMGCLL1-202ENST00000308161 HERC1Q15751 4861 aa11□□□□□ -0.65
HMGCLL1-202ENST00000308161 C9orf163Q8N9P6 203 aa11□□□□□ -0.65
HMGCLL1-202ENST00000308161 MRAP2Q96G30 205 aa11□□□□□ -0.65
HMGCLL1-202ENST00000308161 BTF3L4Q96K17 158 aa11□□□□□ -0.65
HMGCLL1-202ENST00000308161 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
HMGCLL1-202ENST00000308161 H7C423 109 aa10.99□□□□□ -0.65
HMGCLL1-202ENST00000308161 TSHBP01222 138 aa10.99□□□□□ -0.65
HMGCLL1-202ENST00000308161 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
HMGCLL1-202ENST00000308161 TMEM101Q96IK0 257 aa10.99□□□□□ -0.65
HMGCLL1-202ENST00000308161 CAMPP49913 170 aa10.98□□□□□ -0.65
HMGCLL1-202ENST00000308161 HIGD2BQ4VC39 106 aa10.97□□□□□ -0.65
HMGCLL1-202ENST00000308161 OR5A1Q8NGJ0 315 aa10.97□□□□□ -0.65
HMGCLL1-202ENST00000308161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
HMGCLL1-202ENST00000308161 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
HMGCLL1-202ENST00000308161 ZNF25P17030 456 aaPredicted RBP10.96□□□□□ -0.65
HMGCLL1-202ENST00000308161 FCER1GP30273 86 aa10.96□□□□□ -0.65
HMGCLL1-202ENST00000308161 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
HMGCLL1-202ENST00000308161 CNBPP62633 177 aaKnown RBP10.96□□□□□ -0.65
HMGCLL1-202ENST00000308161 C7orf77A4D0Y5 90 aa10.95□□□□□ -0.66
HMGCLL1-202ENST00000308161 ESDP10768 282 aa10.95□□□□□ -0.66
HMGCLL1-202ENST00000308161 XCL1P47992 114 aa10.95□□□□□ -0.66
HMGCLL1-202ENST00000308161 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
HMGCLL1-202ENST00000308161 C15orf56Q8N910 161 aa10.95□□□□□ -0.66
HMGCLL1-202ENST00000308161 IGHV3-64A0A075B6Q5 118 aa10.94□□□□□ -0.66
HMGCLL1-202ENST00000308161 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
HMGCLL1-202ENST00000308161 SMIM27A0A1W2PRY6 76 aa10.94□□□□□ -0.66
HMGCLL1-202ENST00000308161 PANO1I0J062 215 aa10.94□□□□□ -0.66
HMGCLL1-202ENST00000308161 SLPIP03973 132 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms