RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 PGLYRP4Q96LB8 373 aa10.16□□□□□ -0.78
FANCA-201ENST00000305699 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
FANCA-201ENST00000305699 TRAV26-2A0A0B4J265 109 aa10.16□□□□□ -0.78
FANCA-201ENST00000305699 AMTP48728 403 aa10.16□□□□□ -0.78
FANCA-201ENST00000305699 GTSF1Q8WW33 167 aa10.16□□□□□ -0.78
FANCA-201ENST00000305699 PRSS1P07477 247 aa10.15□□□□□ -0.79
FANCA-201ENST00000305699 GATD1Q8NB37 220 aa10.15□□□□□ -0.79
FANCA-201ENST00000305699 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.79
FANCA-201ENST00000305699 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.79
FANCA-201ENST00000305699 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
FANCA-201ENST00000305699 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
FANCA-201ENST00000305699 A8MWL6 223 aa10.14□□□□□ -0.79
FANCA-201ENST00000305699 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
FANCA-201ENST00000305699 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
FANCA-201ENST00000305699 FOXA3P55318 350 aaPredicted RBP10.13□□□□□ -0.79
FANCA-201ENST00000305699 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
FANCA-201ENST00000305699 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
FANCA-201ENST00000305699 CIRBP-AS1Q8TBR5 109 aa10.13□□□□□ -0.79
FANCA-201ENST00000305699 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
FANCA-201ENST00000305699 GFRA4Q9GZZ7 299 aa10.13□□□□□ -0.79
FANCA-201ENST00000305699 DGAT2L7PQ6IED9 249 aa10.12□□□□□ -0.79
FANCA-201ENST00000305699 BORCS7Q96B45 105 aa10.12□□□□□ -0.79
FANCA-201ENST00000305699 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
FANCA-201ENST00000305699 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
FANCA-201ENST00000305699 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
FANCA-201ENST00000305699 CT83Q5H943 113 aa10.1□□□□□ -0.79
FANCA-201ENST00000305699 CLRN3Q8NCR9 226 aa10.1□□□□□ -0.79
FANCA-201ENST00000305699 IGKV3OR2-268A0A0C4DH90 116 aa10.09□□□□□ -0.79
FANCA-201ENST00000305699 ZNF727A8MUV8 499 aa10.09□□□□□ -0.79
FANCA-201ENST00000305699 APCSP02743 223 aa10.09□□□□□ -0.79
FANCA-201ENST00000305699 AMMECR1LQ6DCA0 310 aa10.09□□□□□ -0.79
FANCA-201ENST00000305699 RNASEKQ6P5S7 137 aaKnown RBP10.09□□□□□ -0.79
FANCA-201ENST00000305699 FAM210AQ96ND0 272 aa10.09□□□□□ -0.79
FANCA-201ENST00000305699 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
FANCA-201ENST00000305699 J3QL48 77 aa10.08□□□□□ -0.8
FANCA-201ENST00000305699 LINC01551Q86U37 167 aa10.08□□□□□ -0.8
FANCA-201ENST00000305699 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
FANCA-201ENST00000305699 AP5S1Q9NUS5 200 aa10.08□□□□□ -0.8
FANCA-201ENST00000305699 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
FANCA-201ENST00000305699 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
FANCA-201ENST00000305699 NCR2O95944 276 aa10.07□□□□□ -0.8
FANCA-201ENST00000305699 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
FANCA-201ENST00000305699 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
FANCA-201ENST00000305699 SRP19P09132 144 aaKnown RBP10.07□□□□□ -0.8
FANCA-201ENST00000305699 PMCHP20382 165 aa10.07□□□□□ -0.8
FANCA-201ENST00000305699 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
FANCA-201ENST00000305699 A0A1B0GVG6 124 aa10.06□□□□□ -0.8
FANCA-201ENST00000305699 GAGE12HA6NDE8 117 aa10.06□□□□□ -0.8
FANCA-201ENST00000305699 NDUFS6O75380 124 aaKnown RBP10.06□□□□□ -0.8
FANCA-201ENST00000305699 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
FANCA-201ENST00000305699 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.05□□□□□ -0.8
FANCA-201ENST00000305699 I3L3M4 83 aa10.05□□□□□ -0.8
FANCA-201ENST00000305699 FGF6P10767 208 aa10.05□□□□□ -0.8
FANCA-201ENST00000305699 CNBPP62633 177 aaKnown RBP10.05□□□□□ -0.8
FANCA-201ENST00000305699 ST20Q9HBF5 79 aa10.05□□□□□ -0.8
FANCA-201ENST00000305699 H7C423 109 aa10.04□□□□□ -0.8
FANCA-201ENST00000305699 TMEM191AQ9H0A3 160 aa10.04□□□□□ -0.8
FANCA-201ENST00000305699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
FANCA-201ENST00000305699 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
FANCA-201ENST00000305699 FAM231BA6NCW3 169 aa10.03□□□□□ -0.8
FANCA-201ENST00000305699 GAS8-AS1O95177 125 aa10.03□□□□□ -0.8
FANCA-201ENST00000305699 CFAP161Q6P656 301 aa10.03□□□□□ -0.8
FANCA-201ENST00000305699 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
FANCA-201ENST00000305699 BTF3L4Q96K17 158 aa10.03□□□□□ -0.8
FANCA-201ENST00000305699 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
FANCA-201ENST00000305699 RPL37AP61513 92 aaKnown RBP10.02□□□□□ -0.81
FANCA-201ENST00000305699 TMEM241Q24JQ0 296 aa10.02□□□□□ -0.81
FANCA-201ENST00000305699 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
FANCA-201ENST00000305699 DPH3Q96FX2 82 aa10.02□□□□□ -0.81
FANCA-201ENST00000305699 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
FANCA-201ENST00000305699 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
FANCA-201ENST00000305699 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
FANCA-201ENST00000305699 PANO1I0J062 215 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
FANCA-201ENST00000305699 RAB4AP20338 218 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
FANCA-201ENST00000305699 RIGQ13278 110 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 FAM74A3Q4VXF1 159 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 AMN1Q8IY45 258 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 C15orf56Q8N910 161 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 RNF185Q96GF1 192 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 V9GYV3 84 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
FANCA-201ENST00000305699 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
FANCA-201ENST00000305699 TSHBP01222 138 aa10□□□□□ -0.81
FANCA-201ENST00000305699 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
FANCA-201ENST00000305699 ADIRFQ15847 76 aa10□□□□□ -0.81
FANCA-201ENST00000305699 NUP35Q8NFH5 326 aa10□□□□□ -0.81
FANCA-201ENST00000305699 ISOC2Q96AB3 205 aa10□□□□□ -0.81
FANCA-201ENST00000305699 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
FANCA-201ENST00000305699 SLPIP03973 132 aa9.99□□□□□ -0.81
FANCA-201ENST00000305699 RPL23P62829 140 aaKnown RBP9.99□□□□□ -0.81
FANCA-201ENST00000305699 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
FANCA-201ENST00000305699 OR5A1Q8NGJ0 315 aa9.99□□□□□ -0.81
FANCA-201ENST00000305699 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
FANCA-201ENST00000305699 ESDP10768 282 aa9.99□□□□□ -0.81
FANCA-201ENST00000305699 NAT8BQ9UHF3 227 aa9.99□□□□□ -0.81
FANCA-201ENST00000305699 TRBV27A0A0K0K1C4 114 aa9.98□□□□□ -0.81
FANCA-201ENST00000305699 CHTF8P0CG12 524 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms