RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PF4P02776 101 aa4.71□□□□□ -1.65
USP47-201ENST00000305481 PLNP26678 52 aa4.71□□□□□ -1.65
USP47-201ENST00000305481 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.65
USP47-201ENST00000305481 TEP1Q99973 2627 aaKnown RBP4.71□□□□□ -1.66
USP47-201ENST00000305481 PLAC8L1A1L4L8 177 aa4.71□□□□□ -1.66
USP47-201ENST00000305481 OPRPNQ99935 248 aaPredicted RBP4.71□□□□□ -1.66
USP47-201ENST00000305481 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 IGHV3-53P01767 116 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 RHOHQ15669 191 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 Q6ZTI0 123 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
USP47-201ENST00000305481 C20orf203Q8NBC4 194 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 TMEM263Q8WUH6 116 aaKnown RBP4.7□□□□□ -1.66
USP47-201ENST00000305481 FAM104AQ969W3 186 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 TIMM17AQ99595 171 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 MAPKAPK5-AS1Q8N8E1 139 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 TMEM141Q96I45 108 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 TRGV1A0A0A0MS02 117 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 LINC01549A6NIU2 74 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 ORAOV1Q8WV07 137 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 F8P00451 2351 aa4.7□□□□□ -1.66
USP47-201ENST00000305481 RHODO00212 210 aa4.69□□□□□ -1.66
USP47-201ENST00000305481 EMP1P54849 157 aa4.69□□□□□ -1.66
USP47-201ENST00000305481 PMVKQ15126 192 aa4.69□□□□□ -1.66
USP47-201ENST00000305481 C12orf54Q6X4T0 127 aa4.69□□□□□ -1.66
USP47-201ENST00000305481 TNFRSF18Q9Y5U5 241 aa4.69□□□□□ -1.66
USP47-201ENST00000305481 C11orf86A6NJI1 115 aa4.69□□□□□ -1.66
USP47-201ENST00000305481 NOP10Q9NPE3 64 aaKnown RBP4.69□□□□□ -1.66
USP47-201ENST00000305481 DAZ2Q13117 558 aaKnown RBP4.69□□□□□ -1.66
USP47-201ENST00000305481 NBEAL2Q6ZNJ1 2754 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 TMEM97Q5BJF2 176 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 CHCHD7Q9BUK0 85 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 TRBV25-1A0A075B6N4 114 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 TRAV8-6A0A0B4J262 113 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 IGHV3-38A0A0C4DH36 116 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 CEMP1Q6PRD7 247 aaPredicted RBP4.68□□□□□ -1.66
USP47-201ENST00000305481 GTSF1LQ9H1H1 148 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 PHLDA1Q8WV24 401 aaPredicted RBP4.68□□□□□ -1.66
USP47-201ENST00000305481 C16orf74Q96GX8 76 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 DNAJC30Q96LL9 226 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 C1QTNF4Q9BXJ3 329 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
USP47-201ENST00000305481 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 OVOL2Q9BRP0 275 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 HIGD1BQ9P298 99 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 TRAV4A0A0B4J268 109 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 E9PLD3 99 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 M0QXV9 152 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 INSL3P51460 131 aa4.67□□□□□ -1.66
USP47-201ENST00000305481 A0A1B0GV72 72 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 CKS1BP61024 79 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 HSD52Q0P140 79 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 C9orf66Q5T8R8 295 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 SLC25A29Q8N8R3 303 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 PRADC1Q9BSG0 188 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 PYGO1Q9Y3Y4 419 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 GAGE12BA1L429 117 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 GAGE7O76087 117 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 GAGE12FP0CL80 117 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 GAGE12GP0CL81 117 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 GAGE12IP0CL82 117 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 RRN3P1Q2M238 152 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 NFE4Q86UQ8 179 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 CHAC1Q9BUX1 264 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 FBN1P35555 2871 aaKnown RBP4.66□□□□□ -1.66
USP47-201ENST00000305481 TRBV7-3A0A075B6L6 115 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.66□□□□□ -1.66
USP47-201ENST00000305481 IGKV2-29A2NJV5 120 aaPredicted RBP4.66□□□□□ -1.66
USP47-201ENST00000305481 AMELXQ99217 191 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 UBE2D4Q9Y2X8 147 aa4.66□□□□□ -1.66
USP47-201ENST00000305481 K7EQD1 137 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 VAMP3Q15836 100 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 OR11H2Q8NH07 326 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 SEC11AP67812 179 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 RNASE13Q5GAN3 156 aaKnown RBP4.65□□□□□ -1.66
USP47-201ENST00000305481 PAPPA-AS1Q5QFB9 102 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 VCX2Q9H322 139 aa4.65□□□□□ -1.66
USP47-201ENST00000305481 A0A0J9YXV3 536 aa4.65□□□□□ -1.67
USP47-201ENST00000305481 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
USP47-201ENST00000305481 WFDC9Q8NEX5 89 aa4.65□□□□□ -1.67
USP47-201ENST00000305481 X6R8D5 127 aa4.65□□□□□ -1.67
USP47-201ENST00000305481 TRGV2A0A075B6R0 118 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 TRBV10-1A0A0K0K1A3 114 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 FXYD2P54710 66 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 UBE2D3P61077 147 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 UBE2D2P62837 147 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 SMIM20Q8N5G0 67 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 LOC100131303A0A0U1RQF7 123 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 G3V4G9 280 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 PLEKHB2Q96CS7 222 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
USP47-201ENST00000305481 TMEM223A0PJW6 202 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 GAGE12JA6NER3 117 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 LINC00694P0DN24 101 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms