RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 GAGE12JA6NER3 117 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 PRSS29PA6NIE9 313 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 I3L3M4 83 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 GAGE1Q13065 139 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 GAGE4Q13068 117 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 GAGE5Q13069 117 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 GAGE13Q4V321 117 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 PRSS3P2Q8NHM4 247 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 SMIM2Q9BVW6 85 aa10.49□□□□□ -0.73
UBXN1-202ENST00000301935 RTL8CO15255 209 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BKO60814 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BJP06899 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BOP23527 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BBP33778 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BDP58876 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BCP62807 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST2H2BEQ16778 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.48□□□□□ -0.73
UBXN1-202ENST00000301935 NEGR1Q7Z3B1 354 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 Q8N8P6 123 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BHQ93079 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BNQ99877 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 HIST1H2BMQ99879 126 aa10.48□□□□□ -0.73
UBXN1-202ENST00000301935 G0S2P27469 103 aa10.47□□□□□ -0.73
UBXN1-202ENST00000301935 TIRAPP58753 221 aa10.47□□□□□ -0.73
UBXN1-202ENST00000301935 COTL1Q14019 142 aa10.47□□□□□ -0.73
UBXN1-202ENST00000301935 BAGE3Q86Y29 109 aa10.47□□□□□ -0.73
UBXN1-202ENST00000301935 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
UBXN1-202ENST00000301935 LOC100131303A0A0U1RQF7 123 aa10.46□□□□□ -0.73
UBXN1-202ENST00000301935 LOC389332A0A1B0GUA5 103 aa10.46□□□□□ -0.73
UBXN1-202ENST00000301935 FA2HQ7L5A8 372 aa10.46□□□□□ -0.73
UBXN1-202ENST00000301935 Q9UF83 564 aa10.46□□□□□ -0.73
UBXN1-202ENST00000301935 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 A0A096LPF7 62 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 LINC01546A6NGU7 62 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 LINC01549A6NIU2 74 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 M0R2N4 97 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 LINC00614P0C842 121 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 FCER1GP30273 86 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
UBXN1-202ENST00000301935 ORMDL2Q53FV1 153 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 NIT1Q86X76 327 aa10.45□□□□□ -0.74
UBXN1-202ENST00000301935 CHCHD1Q96BP2 118 aaKnown RBP10.45□□□□□ -0.74
UBXN1-202ENST00000301935 NUDT3O95989 172 aa10.44□□□□□ -0.74
UBXN1-202ENST00000301935 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
UBXN1-202ENST00000301935 LAGE3Q14657 143 aa10.43□□□□□ -0.74
UBXN1-202ENST00000301935 IQCJQ1A5X6 159 aa10.43□□□□□ -0.74
UBXN1-202ENST00000301935 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
UBXN1-202ENST00000301935 S100A6P06703 90 aa10.42□□□□□ -0.74
UBXN1-202ENST00000301935 SMAGPQ0VAQ4 97 aa10.42□□□□□ -0.74
UBXN1-202ENST00000301935 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
UBXN1-202ENST00000301935 TRBV25-1A0A075B6N4 114 aa10.41□□□□□ -0.74
UBXN1-202ENST00000301935 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
UBXN1-202ENST00000301935 IGHV1-24A0A0C4DH33 117 aa10.41□□□□□ -0.74
UBXN1-202ENST00000301935 TSHBP01222 138 aa10.41□□□□□ -0.74
UBXN1-202ENST00000301935 PKIAP61925 76 aa10.41□□□□□ -0.74
UBXN1-202ENST00000301935 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 H7C423 109 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 AMTP48728 403 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 NDUFA6P56556 154 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 LELP1Q5T871 98 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 RNASEKQ6P5S7 137 aaKnown RBP10.4□□□□□ -0.74
UBXN1-202ENST00000301935 LYPD5Q6UWN5 251 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 HSPG2P98160 4391 aa10.4□□□□□ -0.74
UBXN1-202ENST00000301935 HSBP1O75506 76 aa10.39□□□□□ -0.75
UBXN1-202ENST00000301935 ESDP10768 282 aa10.39□□□□□ -0.75
UBXN1-202ENST00000301935 CCL18P55774 89 aa10.39□□□□□ -0.75
UBXN1-202ENST00000301935 Q6ZR54 194 aa10.39□□□□□ -0.75
UBXN1-202ENST00000301935 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
UBXN1-202ENST00000301935 TRAV8-6A0A0B4J262 113 aa10.38□□□□□ -0.75
UBXN1-202ENST00000301935 SERF1AO75920 110 aa10.38□□□□□ -0.75
UBXN1-202ENST00000301935 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
UBXN1-202ENST00000301935 NTM-AS1Q6ZSK4 140 aa10.37□□□□□ -0.75
UBXN1-202ENST00000301935 C20orf203Q8NBC4 194 aa10.37□□□□□ -0.75
UBXN1-202ENST00000301935 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
UBXN1-202ENST00000301935 UBE2L6O14933 153 aa10.36□□□□□ -0.75
UBXN1-202ENST00000301935 ESRGQ1W209 222 aa10.36□□□□□ -0.75
UBXN1-202ENST00000301935 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
UBXN1-202ENST00000301935 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
UBXN1-202ENST00000301935 HBDP02042 147 aa10.35□□□□□ -0.75
UBXN1-202ENST00000301935 NPSP0C0P6 89 aa10.35□□□□□ -0.75
UBXN1-202ENST00000301935 TOMM6Q96B49 74 aa10.35□□□□□ -0.75
UBXN1-202ENST00000301935 TIMM21Q9BVV7 248 aa10.35□□□□□ -0.75
UBXN1-202ENST00000301935 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
UBXN1-202ENST00000301935 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
UBXN1-202ENST00000301935 PACRGQ96M98 296 aaPredicted RBP10.34□□□□□ -0.75
UBXN1-202ENST00000301935 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
UBXN1-202ENST00000301935 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
UBXN1-202ENST00000301935 LRP1BQ9NZR2 4599 aa10.34□□□□□ -0.75
UBXN1-202ENST00000301935 ZNF25P17030 456 aaPredicted RBP10.33□□□□□ -0.76
UBXN1-202ENST00000301935 LINC00310P59036 64 aa10.33□□□□□ -0.76
UBXN1-202ENST00000301935 C1orf134Q5TEV5 83 aa10.33□□□□□ -0.76
UBXN1-202ENST00000301935 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
UBXN1-202ENST00000301935 UPK3BQ9BT76 320 aa10.33□□□□□ -0.76
UBXN1-202ENST00000301935 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
UBXN1-202ENST00000301935 PYGO1Q9Y3Y4 419 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms